Merging

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Jun Xu edited this page Nov 7, 2023 · 8 revisions

Overview

Merging the gene quantification result of samples. The row represents genes, the column represents samples.

Prerequisites

Java 8
http://www.oracle.com/technetwork/java/javase/overview/java8-2100321.html

Usage

From the command line,

java -Xmx100g -jar SiPAS-tools.jar -a Merging -i /data/home/ -o /data/home > log.txt &

-i Input file path, which will automatically find files with "*_Count.txt" in the directory.

-o Output file path, the result will be generated in the countResult folder of this path.

Author

Jun Xu
https://github.com/Junjun-Xu

Song Xu
https://github.com/XscapeCn

Xiaohan Yang
https://github.com/Yangxiaohan0120

Fei Lu
flu@genetics.ac.cn; dr.lufei@gmail.com
https://github.com/Fei-Lu