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190416_PQE1_ODESolver_Attempt_1- Replication of Ke and Perelson Paper .ipynb
190416_PQE1_ODESolver_Attempt_1- Replication of Ke and Perelson Paper .ipynb
 
 
190416_PQE1_ODESolver_Attempt_2-Modification of Ke and Perelson with Virions.ipynb
190416_PQE1_ODESolver_Attempt_2-Modification of Ke and Perelson with Virions.ipynb
 
 
190416_PQE1_ODESolver_Attempt_3-Modification of Ke and Perelson with Drug Decay.ipynb
190416_PQE1_ODESolver_Attempt_3-Modification of Ke and Perelson with Drug Decay.ipynb
 
 
190417_ODE_Modeling of Drug Decay.ipynb
190417_ODE_Modeling of Drug Decay.ipynb
 
 
190417_PQE1_ODESolver_Attempt_4-Modification of Ke and Perelson with Real Concentrations.ipynb
190417_PQE1_ODESolver_Attempt_4-Modification of Ke and Perelson with Real Concentrations.ipynb
 
 
190417_PQE1_ODESolver_Attempt_5-Modification of Ke and Perelson with Two types of cells.ipynb
190417_PQE1_ODESolver_Attempt_5-Modification of Ke and Perelson with Two types of cells.ipynb
 
 
190417_PQE1_ODESolver_Attempt_6-Modification of Ke and Perelson with Two types of cells_parameters from Reeves et al..ipynb
190417_PQE1_ODESolver_Attempt_6-Modification of Ke and Perelson with Two types of cells_parameters from Reeves et al..ipynb
 
 
190423_PQE1_Population Heterogeneity.ipynb
190423_PQE1_Population Heterogeneity.ipynb
 
 
190425_PQE1_Population Heterogeneity_Testing_Antiproliferative Stratgies.ipynb
190425_PQE1_Population Heterogeneity_Testing_Antiproliferative Stratgies.ipynb
 
 
190425_PQE1_Population Heterogeneity_Testing_LRA-Copy1.ipynb
190425_PQE1_Population Heterogeneity_Testing_LRA-Copy1.ipynb
 
 
190425_PQE1_Population Heterogeneity_Testing_LRA.ipynb
190425_PQE1_Population Heterogeneity_Testing_LRA.ipynb
 
 
190430_PQE1_Sensitivity_Analysis_D_LRA.ipynb
190430_PQE1_Sensitivity_Analysis_D_LRA.ipynb
 
 
190430_PQE1_Sensitivity_Analysis_Function_Broken.ipynb
190430_PQE1_Sensitivity_Analysis_Function_Broken.ipynb
 
 
190430_PQE1_Sensitivity_Analysis_LRA.ipynb
190430_PQE1_Sensitivity_Analysis_LRA.ipynb
 
 
190430_PQE1_Sensitivity_Analysis_W.ipynb
190430_PQE1_Sensitivity_Analysis_W.ipynb
 
 
190430_PQE1_Sensitivity_Analysis_d.ipynb
190430_PQE1_Sensitivity_Analysis_d.ipynb
 
 
190430_PQE1_Sensitivity_Analysis_d_ALL.ipynb
190430_PQE1_Sensitivity_Analysis_d_ALL.ipynb
 
 
190501_Testing_Heterogenous_Pop.ipynb
190501_Testing_Heterogenous_Pop.ipynb
 
 
190503_Testing_Heterogenous_LHS_Sampling_D_LRA_keeping_TN_Constant.ipynb
190503_Testing_Heterogenous_LHS_Sampling_D_LRA_keeping_TN_Constant.ipynb
 
 
190503_Testing_new.ipynb
190503_Testing_new.ipynb
 
 
190505_PQE1_Sensitivity_Analysis_D_LRA_LOW_TN.ipynb
190505_PQE1_Sensitivity_Analysis_D_LRA_LOW_TN.ipynb
 
 
190505_PQE1_Sensitivity_Analysis_D_LRA_REG_TN.ipynb
190505_PQE1_Sensitivity_Analysis_D_LRA_REG_TN.ipynb
 
 
190507_Figure_1.ipynb
190507_Figure_1.ipynb
 
 
190507_adjust_pop_MAKESURETODOFORALL.ipynb
190507_adjust_pop_MAKESURETODOFORALL.ipynb
 
 
190509_TN_POP_Therapies.ipynb
190509_TN_POP_Therapies.ipynb
 
 
README.md
README.md
 
 

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LR-Modeling

Sorry the code is a little hackey. Didn't upload out the output files because they're too large. The notebooks do help generate the output files so everything can be remade.

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