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Benchmarking Recent Computational Tools for DNA-binding Protein Identification

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Name		Name	Last commit message	Last commit date
Latest commit History 12 Commits
BLAST		BLAST
Dataset		Dataset
LSTM-CNN_Fusion		LSTM-CNN_Fusion
LocalDPP		LocalDPP
Majority_Voting		Majority_Voting
PSSM_Construction		PSSM_Construction
Models.zip		Models.zip
README.md		README.md

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Repo Summary

LocalDPP, LSTM-CNN_Fusion and BLAST (after proposed modification) tool software have been provided in their corresponding folders with clear instructions on how to run
Models.zip contains the models for running the above tools; model names are self-explanatory
LocalDPP and LSTM-CNN_Fusion require PSSM matrix as part of the feature generation process
A user-friendly PSSM generation pipeline has been provided in PSSM_Construction folder
Majority_Voting folder contains code for using the 3 tool predictions to get the majority voted predictions
The proposed DNA binding protein identification train and test dataset have been provided inside Dataset folder