Pinned Loading

1. Arboretum2.0 Arboretum2.0 Public

   The Arboretum 2.0 is the next release of the original code of Arboretum. It makes running Arboretum easier by taking care of initial cluster assignments.

   C 2 1

2. merlin-p merlin-p Public

   A prior-based integrative framework for functional transcriptional regulatory network inference (Fotuhi Siahpirani & Roy, Nucleic Acids Research 2017)

   C 5 6

3. mrtle mrtle Public

   Multi-species regulatory network learning (Koch et al, Cell Systems 2017)

   C 2 2

4. grinch grinch Public

   GRiNCH: Graph-Regularized NMF and Clustering for Hi-C

   C 10 1

5. HiC-Reg HiC-Reg Public

   HiC-Reg is a tool to predict Hi-C contact counts from one-dimensional regulatory signals

   C 11 3

6. drmn drmn Public

   DRMN with multi-task learning regression

   C 5 1