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WIP v5 Ischemia Tutorial
williamfreigang Aug 24, 2018
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Ischemia Tutorial WIP
williamfreigang Aug 28, 2018
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Ischemia Tutorial WIP
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Merge branch 'gh-pages' of https://github.com/williamfreigang/scirun.…
williamfreigang Oct 3, 2018
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Merge pull request #15 from williamfreigang/gh-pages
jessdtate Jan 16, 2019
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Merge pull request #20 from nids2001/ischemia-tutorial
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dcwhite Oct 30, 2019
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4 changes: 2 additions & 2 deletions BasicTutorial.md
Original file line number Diff line number Diff line change
Expand Up @@ -86,7 +86,7 @@ To visualize the field geometry, instantiate module **ShowField** in the **Visua
<figcaption>Figure 2.5 SCIRun can be used to visualize the structured mesh.</figcaption>
</figure>

Apply a colored scale to the data values on the geometry using **CreateStandardColorMaps** and **RescaleColorMaps** modules in **Visualization** (<a href="#rescale">Figure 2.6</a>). Colors can be manipulated using the CreateStandardColorMap UI and RescaleColorMap UI (<a href="#viewscene">Figure 2.7</a>). Change the coloring scheme to Blackbody using the drop-down menu in the CreatSrandardColorMap UI.
Apply a colored scale to the data values on the geometry using **CreateStandardColorMaps** and **RescaleColorMaps** modules in **Visualization** (<a href="#rescale">Figure 2.6</a>). Colors can be manipulated using the CreateStandardColorMap UI and RescaleColorMap UI (<a href="#viewscene">Figure 2.7</a>). Change the coloring scheme to Blackbody using the drop-down menu in the CreateStandardColorMap UI.

<figure id="rescale">
<img src="BasicTutorial_figures/colorscale.png" alt="Apply and rescale a colormap to data values on the geometry."/>
Expand All @@ -100,7 +100,7 @@ Apply a colored scale to the data values on the geometry using **CreateStandardC

Return to the default color scale. Use the sliders in the GetSlicesFromStructuredFieldByIndices UI to change slice position within the geometry. Compare with <a href="#rescale">Figure 2.6.</a>

<figure id="getsclice">
<figure id="getslice">
<img src="BasicTutorial_figures/sliceselect.png" alt="Different cross sections can be visualized within the geometry using GetSlicesFromStructuredFieldbyIndices. "/>
<figcaption>Figure 2.8 Different cross sections can be visualized within the geometry using GetSlicesFromStructuredFieldbyIndices.</figcaption>
</figure>
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884 changes: 884 additions & 0 deletions IschemiaTutorial.md

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1 change: 1 addition & 0 deletions index.md
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Expand Up @@ -24,6 +24,7 @@ Doc v1.0c
- [Module Reference](modules.html)
- [Python API 0.2](python.html)
- [Basic Tutorial](BasicTutorial.html)
- [Ischemia Tutorial](IschemiaTutorial.html)
- [SCIRun5 Module Generation](SCIRun5ModuleGeneration.html)