Sarder Lab
- 24 followers
- United States of America
- pinaki.sarder@ufl.edu
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- kidney_hfm_eval Public
This repository contains code to extract features from 11 different foundation models and do linear, kNN probing on the extracted features
SarderLab/kidney_hfm_eval’s past year of commit activity - Spatial-Omics-Plugins Public
SarderLab/Spatial-Omics-Plugins’s past year of commit activity - CombinedFeatureExtraction Public
SarderLab/CombinedFeatureExtraction’s past year of commit activity - procurement-biopsy-pathomics-ml Public Forked from jeremysrubin/procurement-biopsy-pathomics-ml
Code used for training and testing machine learning models with donor clinical and pathomic biopsy features to predict kidney transplant recipient outcomes for paper in preparation titled: "Multimodal ComPRePS: Integrating High-dimensional Procurement Biopsy Pathomics and Clinical Data for Prediction of Allograft Outcomes"
SarderLab/procurement-biopsy-pathomics-ml’s past year of commit activity - Tubule_Lumen_Filter_Plugin Public
This plugin filters the lumen based on area threshold by taking input as nuclei and sub compartment segmentation json files and outputs a refined sub compartment segmentation json file
SarderLab/Tubule_Lumen_Filter_Plugin’s past year of commit activity - wsi_annotations_kit Public Forked from spborder/wsi_annotations_kit
utility functions for generation, conversion, and saving annotation files for various whole slide image viewers
SarderLab/wsi_annotations_kit’s past year of commit activity - Histo-cloud Public
SarderLab/Histo-cloud’s past year of commit activity
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