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PanPhlAn 3.1

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@leonarDubois leonarDubois released this 20 Jan 11:12
· 13 commits to master since this release
3.1
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Learn about vigilant mode.

Minor convenience update

  • panphlan_download_pangenome.py now includes md5 checksum, automatic retries and automatic file removing after extraction
  • panphlan_map.py : temporary location can be specified, output in no longer compressed by bz2 (more convenient to create tar.bz2 archives with all results )
  • panphlan_profile.py : input can be a directory or a text file containing path of input files
  • Removed panphlan_find_gene_grp.py as it was full of experimental and unfinished code
  • Wiki and Tutorial updates
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