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  1. Enhanced-Sampling-in-AMBER-tutorial Enhanced-Sampling-in-AMBER-tutorial Public

    Tutorials on doing AMBER based Metadynamics and Gaussian Accelerated MD (GaMD)

    Python 12 3

  2. NEP-GPUMD-tutorial NEP-GPUMD-tutorial Public

    An example of training a NEP potential on Pt@zeolite database and running a GPUMD simulation

    Shell 2

  3. ParGaMD ParGaMD Public

    Parallelizable Gaussian Accelerated Molecular Dynamics

    Shell 11 5

  4. Data_Au_Zeo_Diffusion Data_Au_Zeo_Diffusion Public

    Supporting Data for "Stability and Dynamics of Zeolite-confined Gold Nanoclusters"

    Jupyter Notebook 2

  5. ParMetaD ParMetaD Public

    GPU Parallelizable Metadynamics simulations

    Shell 1

  6. AMBER-Tutorial-Alanine-Dipeptide AMBER-Tutorial-Alanine-Dipeptide Public

    Readymade file for the AMBER tutorial on the simulation of Alanine Dipeptide

    Shell