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danielnachun merged 1 commit into from
Apr 21, 2025
Merged

update install instructions #73

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12 changes: 6 additions & 6 deletions vignettes/installation.Rmd
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Original file line number Diff line number Diff line change
Expand Up @@ -35,8 +35,8 @@ Install major releases using pre-built conda package with a conda-compatible pac

Global pixi installation is the easiest way to use the conda package
```bash
pixi global install r-base # Install r-base as a global package if not already installed
pixi global install --environment r-base r-colocboost # Inject r-colocboost into r-base global environment
pixi global install -c dnachun -c conda-forge r-base # Install r-base as a global package if not already installed
pixi global install -c dnachun -c conda-forge --environment r-base r-colocboost # Inject r-colocboost into r-base global environment
```
The package can also be added to a local pixi environment
```bash
Expand All @@ -45,7 +45,7 @@ pixi add r-colocboost # Add r-colocboost as a dependency to the environment
```
Micromamba is recommended instead of conda or mamba for traditional conda environments
```bash
micromamba install -c dnachun r-colocboost
mamba install -c dnachun r-colocboost
conda install -c dnachun r-colocboost
```
micromamba install -c dnachun -c conda-forge r-colocboost
mamba install -c dnachun -c conda-forge r-colocboost
conda install -c dnachun -c conda-forge r-colocboost
```