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added protein n-gram #6

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added cli ... untested for now

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added protein n-gram #6

added cli ... untested for now
b3faaa8
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Codecov / codecov/project succeeded Apr 4, 2026 in 0s

46.34% (+3.14%) compared to 40dfebd

View this Pull Request on Codecov

46.34% (+3.14%) compared to 40dfebd

Details

Codecov Report

❌ Patch coverage is 53.77358% with 49 lines in your changes missing coverage. Please review.
✅ Project coverage is 46.34%. Comparing base (40dfebd) to head (b3faaa8).
⚠️ Report is 2 commits behind head on main.

Files with missing lines Patch % Lines
petasus/scripts/add_peptidetoprotein.py 0.00% 42 Missing ⚠️
petasus/protein_ngram.py 89.06% 7 Missing ⚠️
Additional details and impacted files 
@@            Coverage Diff             @@
##             main       #6      +/-   ##
==========================================
+ Coverage   43.20%   46.34%   +3.14%     
==========================================
  Files           8       10       +2     
  Lines         250      356     +106     
==========================================
+ Hits          108      165      +57     
- Misses        142      191      +49

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