Example HW4 solution

On HPC:

Run the mk_skel.sh martin script
Copy the input data to /scratch/$USER/martin/data_in
Copy the contents of the scripts directory here to /scratch/$USER/martin/scripts
cd /scratch/$USER/martin/scripts
./run_all.sh

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
design		design
.gitignore		.gitignore
README.md		README.md
example_solution		example_solution
inputs.txt		inputs.txt
run_all.sh		run_all.sh
run_bedpost.sh		run_bedpost.sh
run_bedpost_post.sh		run_bedpost_post.sh
run_bedpost_pre.sh		run_bedpost_pre.sh
run_dtifit.sh		run_dtifit.sh
run_eddy.sh		run_eddy.sh
run_eddy_mp.sh		run_eddy_mp.sh
run_topup.sh		run_topup.sh
sbatch_bedpost.sh		sbatch_bedpost.sh
sbatch_bedpost_post.sh		sbatch_bedpost_post.sh
sbatch_bedpost_pre.sh		sbatch_bedpost_pre.sh
sbatch_dtifit.sh		sbatch_dtifit.sh
sbatch_eddy.sh		sbatch_eddy.sh
sbatch_eddy_mp.sh		sbatch_eddy_mp.sh
sbatch_topup.sh		sbatch_topup.sh

Provide feedback