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30 Open 44 Closed
30 Open 44 Closed
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Issues list

unexpected arg 'graphic' in compute_seq_identity() line 182 in msa.py
#167 opened May 23, 2025 by marionchv
Add pymol example to fetch PDB sequence and structure for exemple in cocoatree
#166 opened May 5, 2025 by NelleV
Don't rely on pickle when loading original sectors in datasets
#165 opened May 5, 2025 by NelleV
Why do we return a tuple in pdb_seq in datasets?
#164 opened May 5, 2025 by NelleV
@NelleV
Using structured arrays instead of dictionaries enhancement New feature or request
#161 opened Feb 19, 2025 by ijunier
@NelleV
bug dans exemple plot sector on phylogeny ?
#159 opened Feb 19, 2025 by choberts
A function to question position involvement in a sector? enhancement New feature or request
#156 opened Feb 19, 2025 by saphia
Feedback on API documentation documentation Improvements or additions to documentation
#155 opened Feb 19, 2025 by saphia
9 tasks
Propose a simplification/overarching of functions for quick, user-friendly handling of the API
#154 opened Feb 19, 2025 by ijunier
Export des secteurs exemple "Perform full SCA analysis ... " fichier fasta seulement
#152 opened Feb 19, 2025 by choberts
1
Use c_msa.compute_seq_weights instead of c_pos.compute_seq_weights in plot_full_SCA_analysis
#150 opened Feb 19, 2025 by ijunier
Add figure example for indicating the position of sector residues on the linear sequence documentation Improvements or additions to documentation
#144 opened Feb 19, 2025 by ijunier
Add tutorial page to provide the bare minimum for the user to handle their own data documentation Improvements or additions to documentation
#142 opened Feb 19, 2025 by ijunier
Adding info to Documentation landing page documentation Improvements or additions to documentation
#141 opened Feb 19, 2025 by saphia
Adding install instructions to README file documentation Improvements or additions to documentation
#140 opened Feb 19, 2025 by saphia
1
Broken link in README file bug Something isn't working documentation Improvements or additions to documentation
#138 opened Feb 19, 2025 by saphia
Extract only the num. of components needed from SVD API change enhancement New feature or request
#131 opened Feb 11, 2025 by NelleV
clean argument in load_MSA is not in doc documentation Improvements or additions to documentation
#126 opened Feb 3, 2025 by ijunier
S1 serine protease data is problematic CRITICAL
#119 opened Jan 30, 2025 by NelleV
@NelleV
heatmap legend in visualization
#118 opened Jan 30, 2025 by margauxjullien
Use SCA instead of Cij in examples (and everywhere) documentation Improvements or additions to documentation
#112 opened Jan 28, 2025 by ijunier
rename filt_seqs by sequences_filt (in filter_gap_pos) documentation Improvements or additions to documentation
#107 opened Jan 28, 2025 by ijunier
Better description of annotation, phylogenetic tree and PDB files enhancement New feature or request
#96 opened Jan 17, 2025 by margauxjullien
@margauxjullien
API : improve icList enhancement New feature or request
#94 opened Jan 16, 2025 by margauxjullien
@margauxjullien
Adding metadata on both sides of the heatmap enhancement New feature or request
#86 opened Jan 15, 2025 by ijunier
ProTip! Updated in the last three days: updated:>2025-05-26.