Port workflow improvements from quarto-book-template#147
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Port workflow improvements from quarto-book-template#147
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Co-authored-by: d-morrison <2474437+d-morrison@users.noreply.github.com>
Co-authored-by: d-morrison <2474437+d-morrison@users.noreply.github.com>
Co-authored-by: d-morrison <2474437+d-morrison@users.noreply.github.com>
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[WIP] Port over improvements from workflow versions
Port workflow improvements from quarto-book-template
Jan 19, 2026
d-morrison
requested changes
Jan 19, 2026
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| - name: Disable renv | ||
| run: echo "RENV_CONFIG_AUTOLOADER_ENABLED=FALSE" >> $GITHUB_ENV |
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Reverted in 4451c2c - the "Disable renv" step has been restored to the original workflow.
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| - name: Install system dependencies | ||
| run: | | ||
| sudo apt-get update | ||
| sudo apt-get install -y jags libcurl4-openssl-dev libpng-dev libfontconfig1-dev libjpeg-dev |
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Reverted in 4451c2c - the duplicate system dependencies installation step with jags has been restored to the original workflow.
Co-authored-by: d-morrison <2474437+d-morrison@users.noreply.github.com>
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Jan 19, 2026
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Syncs GitHub Actions workflows with improvements made in the quarto-book-template repository.
Updated Workflows
New Workflows
Both new workflows include supporting scripts (check-bibliography-dois.R, check-non-standard-chars.py).
Notes
Other workflow files (check-spelling.yaml, copilot-setup-steps.yml, lint-project.yaml) remain unchanged to preserve existing lab-manual-specific configurations.
Preview and publish workflows unchanged—lab-manual requires R setup for code chunk rendering.
Original prompt
💡 You can make Copilot smarter by setting up custom instructions, customizing its development environment and configuring Model Context Protocol (MCP) servers. Learn more Copilot coding agent tips in the docs.