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I might not plan to merge this branch into 'main', but regardless, @ravipatel4 I'd love a double-check of the DGE methodology if you have a chance. I inherited the original code, that I functionized here, through Nick from you! |
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This function runs DGE between 2 groups, and can loop across multiple clusters, running DGE within each one. It can account for one independent factor, like sequencing library or batch within its the model.
Before merge: