Pcoa--emperor solution#43

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averagehat wants to merge 28 commits intoVDBWRAIR:masterfrom

averagehat:PCOA

Commits on Jul 22, 2015

degen.py working with minimal tests
Panciera
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Merge branch 'master' of https://github.com/VDBWRAIR/bio_pieces
Panciera
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Commits on Jul 31, 2015

Building up pca analysis for fasta sequence alignment
necrolyte2
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This notebook will build what we think is a correct 3d axis for pca analysis. Will convert to regular python
necrolyte2
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Converted ipython notebook to script that takes in fasta file path and optionally output file location
necrolyte2
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Commits on Aug 3, 2015

Commits on Aug 11, 2015

ipython notebook for messing around with
necrolyte2
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Commits on Aug 12, 2015

Commits on Aug 14, 2015

make_pcoa is now optional and documented
Panciera
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degen files belong in different branch
Panciera
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added make_pcoa to index
Panciera
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removed old PCA stuff
Panciera
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finished removing old pca stuff
Panciera
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removed matplotlib
Panciera
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Commits on Aug 18, 2015

Update .travis.yml
averagehat
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