DisplacementsAnalysis computes atomic displacements relative to an optional reference frame.
curl -sSL https://raw.githubusercontent.com/VoltLabs-Research/CoreToolkit/main/scripts/install-plugin.sh | bash -s -- DisplacementsAnalysisUsage:
displacement-analysis <lammps_file> [output_base] [options]| Argument | Required | Description | Default |
|---|---|---|---|
<lammps_file> |
Yes | Input LAMMPS dump file. | |
[output_base] |
No | Base path for output files. | derived from input |
--reference <file> |
No | Reference LAMMPS dump file. If omitted, the current frame is used. | current frame |
--mic |
No | Use minimum image convention. | true |
--affineMapping <mode> |
No | Affine mapping mode: noMapping, toReferenceCell, toCurrentCell. |
noMapping |
--threads <int> |
No | Maximum worker threads. | auto |
--help |
No | Print CLI help. |