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ekofman merged 1 commit into from
Jun 3, 2025
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Update README.md #69

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19 changes: 19 additions & 0 deletions README.md
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Expand Up @@ -2,6 +2,7 @@
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# Table of Contents
- [Introduction](#introduction)
- [System Requirements](#system-requirements)
- [Installation](#installation)
- [Notes](#notes)
- [Command Parameters](#command-parameters)
Expand All @@ -24,6 +25,24 @@ Speed and memory profiles:
Comparison to existing tools for bulk RNA-seq data:
![MARINE benchmarking](images/MARINE_benchmarks.jpg)

# System Requirements

## Hardware requirements

MARINE requires only a standard computer with enough RAM to support the in-memory operations.

## Software requirements

OS Requirements

This package is supported for macOS and Linux. The package has been tested on the following systems:

Linux: Ubuntu 16.04

## Python Dependencies

MARINE uses Python >= 3.10, and all required dependencies can be installed using the conda or mamba commands described below.

# Installation
Simply git clone this repository using the link at the top right on the main repository page. Should take at most a minute or two.

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