Skip to content

[schemas] Enhanced thoughts columns and utility RPCs#7

Open
alanshurafa wants to merge 30 commits intomainfrom
contrib/alanshurafa/enhanced-thoughts
Open

[schemas] Enhanced thoughts columns and utility RPCs#7
alanshurafa wants to merge 30 commits intomainfrom
contrib/alanshurafa/enhanced-thoughts

Conversation

@alanshurafa
Copy link
Copy Markdown
Owner

Summary

  • Adds 6 structured columns to thoughts: type, sensitivity_tier, importance, quality_score, source_type, enriched
  • Installs 3 RPCs: search_thoughts_text(), brain_stats_aggregate(), get_thought_connections()
  • All DDL idempotent, includes backfill queries
  • Part 1 of 12 in OB1 Alpha Milestone

Test plan

  • Run schema.sql on fresh and existing OB1 projects
  • Verify RPCs return expected results
  • Confirm OB1 PR Gate passes

@github-actions github-actions Bot added the schema label Apr 6, 2026
Copy link
Copy Markdown

@chatgpt-codex-connector chatgpt-codex-connector Bot left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

💡 Codex Review

Here are some automated review suggestions for this pull request.

Reviewed commit: eb62324a8d

ℹ️ About Codex in GitHub

Your team has set up Codex to review pull requests in this repo. Reviews are triggered when you

  • Open a pull request for review
  • Mark a draft as ready
  • Comment "@codex review".

If Codex has suggestions, it will comment; otherwise it will react with 👍.

Codex can also answer questions or update the PR. Try commenting "@codex address that feedback".

Comment thread schemas/enhanced-thoughts/schema.sql Outdated
Comment on lines +154 to +155
-- Total thoughts (all-time)
SELECT count(*) INTO v_total FROM thoughts;
Copy link
Copy Markdown

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

P2 Badge Apply time filter to total count in brain stats

brain_stats_aggregate computes v_since from p_since_days, but v_total is still counted across all rows, so the returned total does not match the same window used for top_types/top_topics. When callers request a bounded window (for example, last 7 days), this returns internally inconsistent stats and can mislead dashboards that assume all fields are windowed together.

Useful? React with 👍 / 👎.

+ coalesce(array_length(c.shared_people, 1), 0))::INTEGER AS overlap_count
FROM candidates c
ORDER BY overlap_count DESC, c.created_at DESC
LIMIT p_limit;
Copy link
Copy Markdown

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

P2 Badge Clamp connection limit input before applying LIMIT

Using LIMIT p_limit directly makes this RPC fragile to caller input: a negative value raises a runtime SQL error (LIMIT must not be negative), and an explicit NULL removes the limit entirely, which can return an unbounded result set and hurt performance on large tables. This function should sanitize p_limit the same way search_thoughts_text does.

Useful? React with 👍 / 👎.

@github-actions github-actions Bot added documentation Improvements or additions to documentation integration recipe labels Apr 6, 2026
justfinethanku and others added 23 commits April 12, 2026 21:57
* [recipes] Add repo learning coach recipe

* [recipes] Harden repo learning coach sync and reads
…es-Projects#146)

* [dashboards] Add Workflow kanban board with drag-and-drop, mobile support, and MCP progress_task tool

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* [dashboards] Mobile UX fixes: modal centering, landscape layout, touch drag-and-drop

- Fix modal positioning with createPortal to escape DnD transform context
- Add phone landscape CSS to hide sidebar and show mobile topbar
- Switch to MouseSensor + TouchSensor for proper mobile drag delay
- Add touchAction pan-y for scroll + drag coexistence
- Add allowedDevOrigins for mobile dev testing
- Add suppressHydrationWarning for browser extension compatibility

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [dashboards] Allow pinch-to-zoom on kanban cards

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [schemas] Add workflow status tracking columns for kanban board

Adds status and status_updated_at columns to the thoughts table,
enabling kanban-style workflow management for task and idea types.
Includes migration SQL, backfill for existing thoughts, and partial index.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [dashboards] Add Workflow kanban board with drag-and-drop and mobile support

Adds a full kanban board interface for managing task and idea thoughts:
- Drag-and-drop between status columns (New/Planning/Active/Review/Done)
- Touch-friendly with 200ms hold delay, pinch-to-zoom enabled
- Collapsible columns with localStorage persistence
- Inline edit modal for status, priority, type, and content
- Dashboard summary widget showing active workflow items
- Mobile-first responsive layout with full-screen edit on small screens
- @dnd-kit for accessible drag-and-drop (mouse + touch sensors)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [dashboards] Add delete button to kanban card edit modal

Adds a Delete button in the kanban card modal footer with a confirmation
banner before permanently deleting the thought. Wires up a new
/api/kanban/delete route and optimistic removal from the board.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

* [dashboards] Make delete confirmation a separate popup dialog

Replace the inline banner with a standalone centered dialog that
overlays on top of the edit modal, with clear title, description,
and Cancel/Delete buttons.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* [dashboards] Fix deleteThought parsing empty response body

The REST API returns an empty body on DELETE, but apiFetch always
called res.json() causing a parse error. Inline the fetch so it
skips JSON parsing.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Ivan <ivan@openbrain.dev>
Co-authored-by: Claude Sonnet 4.6 <noreply@anthropic.com>
…ng (NateBJones-Projects#141)

Syncs Claude Code's local memory saves to Open Brain via
mcp__open-brain__capture_thought so memories are accessible
from ChatGPT, Claude Desktop, Codex, and any MCP-connected client.

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
…fix skill divergence (NateBJones-Projects#135)

* [recipes] Update life-engine schema: user_id TEXT, add weekly_review/cron_state types

- Changed user_id from UUID to TEXT across all 5 tables (supports
  Telegram chat_id as identifier without UUID padding hacks)
- Added weekly_review and cron_state to briefing_type check constraint

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* [recipes] Clean up Life Engine: add state table, simplify loop timing, fix skill divergence

- Add life_engine_state key-value table for runtime state (cron job ID,
  sleep schedule) instead of overloading briefing log with cron_state type
- Remove cron_state from briefing_type CHECK constraint
- Simplify Dynamic Loop Timing from 6 tiers to 4 (15m/30m/60m/one-shot)
- Replace duplicate embedded skill in README with pointer to life-engine-skill.md
- Add user_responded update logic to Rule 7 for self-improvement engagement tracking
- Add timezone note to skill time windows
- Fix platform references to include Discord alongside Telegram
- Add RLS comment explaining why no row policies are needed
- Update metadata.json date

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* [recipes] Harden Life Engine permissions: lead with settings.json allowlist, scope MCP tools

- Restructure Step 6 to recommend settings.json allowlist as default (Option A)
- Replace broad mcp__open-brain__* and mcp__supabase__* wildcards with
  specific tool names (search_thoughts, list_thoughts, execute_sql, etc.)
- Include CronCreate and CronDelete in the default allowlist
- Demote --dangerously-skip-permissions to Option D (testing only)
- Update Quick Setup and Step 7 launch commands to use settings.json approach
- Addresses HIGH finding from security audit

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* [recipes] Add rain forecast to Life Engine morning briefing via Open-Meteo

- Add Weather section to skill with Open-Meteo API call (free, no API key)
- Include rain windows with time ranges and probability in morning briefing
- Default coordinates: Portland, OR (45.52, -122.68), configurable via life_engine_state
- Only show rain line when precipitation_probability >= 30%
- Update schema comment to document latitude/longitude state keys

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* [recipes] Add Daily Capture, portable customizations, and manual sync rule to Life Engine

Backport portable customizations from installed SKILL.md into the recipe:
date anchor, database note, user identity, valid briefing types, proactive
chat_id, rules 9-14. Add Daily Capture prompt in evening window with
capture_thought integration. Add Rule 14 requiring manual sync between
recipe and installed skill files.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* [recipes] Fix hallucinated column name: briefings table uses 'content' not 'summary'

Add explicit column reference note to prevent the LLM from hallucinating
a 'summary' column on life_engine_briefings — the correct column is 'content'.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* [recipes] Address PR review: Discord support, migration steps, permission docs

Fixes all issues from PR NateBJones-Projects#135 review:
- P1: Add Bash(date/curl) and capture_thought to README allowlist examples
- P1: Make channel event handling platform-agnostic (Telegram + Discord)
  in skill Rules 7, 10, 11 and Channel Tools section
- P1: Add upgrade migration steps to schema.sql for user_id UUID→TEXT
- P2: Add CHECK constraint on delivered_via ('telegram', 'discord')
- P2: Add single-user assumption comment on life_engine_state table
- Bump version to 1.1.0, update date to 2026-04-01

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* [recipes] Broaden Bash permission to Bash(*) — scoped patterns are fragile

Scoped Bash patterns like Bash(date *) and Bash(curl -s *api.open-meteo.com*)
break when the LLM varies its exact command syntax between runs, causing
silent permission blocks during unattended operation. Replace with Bash(*)
since Life Engine only uses benign read-only commands (date, curl) and
Rule 11 prevents dangerous execution from external triggers.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
…teBJones-Projects#125)

Replaces the empty stub with a working zero-infrastructure approach
using Claude Code scheduled tasks + Open Brain MCP + Gmail MCP.
Preserves the Edge Function approach as a planned future option.

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
…es-Projects#37)

* [recipes] Vercel + Neon + Telegram alternative architecture

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* [fix] Replace local MCP pattern with custom connectors (PR review feedback)

Replace claude_desktop_config.json + mcp-remote bridge instructions with
Claude Desktop custom connectors UI approach in both Step 8 and the
Troubleshooting section, aligning with CONTRIBUTING.md Rule #14.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
…BJones-Projects#171)

* [recipes] ChatGPT import v2: multi-thought knowledge extraction

Replace 1-3 sentence summarization with structured knowledge extraction
that produces 2-5 typed thoughts per conversation (decision, preference,
learning, context, brainstorm, reference) with enriched metadata.

Key changes to import-chatgpt.py:
- Branch resolution via current_node parent-pointer walk
- Content type dispatch for 14 export message formats (voice, reasoning, web search, code)
- Signal-based filtering replaces regex title matching
- Session boundary detection for multi-day conversations
- Semantic deduplication via match_thoughts RPC
- Re-import handling with update_time/content_hash detection
- Embed thought content, not [ChatGPT: title] prefix
- --store-conversations for optional conversation history with pyramid summaries
- --focus flag with presets (tech, strategy, personal, creative) and custom text
- --openrouter-model flag for model selection
- --max-words flag to skip oversized conversations (default: 50000)
- Robust JSON parsing for non-OpenAI models (Anthropic, Ollama)
- Accurate progress display with percentage and skip counts

New files:
- chatgpt_parser.py: parsing, content dispatch, filtering, session detection
- schema.sql: chatgpt_conversations table with pyramid summaries and indexes

All existing CLI flags preserved (--dry-run, --model ollama, --after/--before,
--limit, --report, --verbose, --raw, --ingest-endpoint).

* [recipes] Fix ChatGPT import filtering defaults

---------

Co-authored-by: Jonathan Edwards <justfinethanku@gmail.com>
NateBJones-Projects#160)

* [recipes] Local Ollama embeddings — zero-cost alternative to OpenRouter

Generate embeddings locally via Ollama and insert into Supabase.
Keeps the existing OB1 architecture, only swaps the embedding provider.

Five models tested including gte-qwen2-1.5b (1536-dim) which is
drop-in compatible with the default Open Brain schema.

Includes quality benchmarks comparing discrimination power across
all five models.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* Fix markdown lint errors in README

Add blank lines around fenced code blocks (MD031) and merge
consecutive blockquotes (MD028).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [recipes] Fix local Ollama env loading docs

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Co-authored-by: Jonathan Edwards <justfinethanku@gmail.com>
…s-Projects#150)

* [docs] Fix MD028 blank line between blockquotes in getting-started guide

Removes blank line between WARNING and IMPORTANT blockquotes that was
failing markdownlint across all PRs.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* Fix claudeception recipe: convert multi-line YAML descriptions to single-line

Multi-line descriptions (description: |) break agent routing silently.
Nate's March 2026 Skills Standard requires single-line YAML descriptions
for reliable semantic matching. Fixed 3 instances: the recipe's own
description and 2 template examples.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [recipes] Clean up Claudeception docs formatting

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Co-authored-by: Jonathan Edwards <justfinethanku@gmail.com>
…NateBJones-Projects#148)

* fix(professional-crm): remove Accept header patch causing SSE reconnect loop

The Accept: text/event-stream header patch forced StreamableHTTPTransport
into SSE mode on every request. Since Supabase edge functions are stateless,
the SSE stream terminates immediately after each response — causing the MCP
client to reconnect every ~2 seconds (~43k invocations/day).

StreamableHTTPTransport is request/response by design. Removing the patch
lets it respond with plain JSON, eliminating the reconnect loop entirely.

* fix(professional-crm): force JSON-only Accept header to prevent SSE reconnect loop

Removing text/event-stream from the Accept header before it reaches
StreamableHTTPTransport prevents it from opening SSE streams. MCP clients
send Accept: application/json, text/event-stream per spec -- this is what
triggers SSE mode even without the original workaround.

JSON-only responses close cleanly, eliminating the boot/shutdown cycle.
…ateBJones-Projects#139)

* recipes: add adaptive capture classification with confidence gating

* recipes: address review — fix author, OB1 types, add TypeScript implementation

* recipes: incorporate GitHub edits to README, classifier prompt, and metadata

* [recipes] Tighten adaptive capture setup and threshold updates

---------

Co-authored-by: Jonathan Edwards <justfinethanku@gmail.com>
…ateBJones-Projects#133)

* Add update_professional_contact tool to CRM extension

Adds the ability to update existing contact fields (name, company,
title, email, phone, tags, notes, follow_up_date, etc.) which was
proposed in NateBJones-Projects#93 but never implemented. Only provided fields are
updated, and the existing updated_at trigger handles timestamping.

* Allow clearing follow_up_date by passing null or empty string

Fixes the case where a follow-up date, once set, could never be
cleared — leaving contacts permanently stuck in get_follow_ups_due.

* [extensions] Document contact update tool

---------

Co-authored-by: Matt Hallett <matthallett@gmail.com>
Co-authored-by: Jonathan Edwards <justfinethanku@gmail.com>
…es-Projects#161)

* Fix pre-existing markdownlint errors across 15 files

Add blank lines around headings (MD022), fenced code blocks (MD031),
and between adjacent blockquotes (MD028). Fix broken link fragment
(MD051) and remove extra blank line (MD012). No content changes.

These errors were blocking CI on all open PRs since the lint check
runs repo-wide.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [docs] Preserve README links during markdown cleanup

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Co-authored-by: Jonathan Edwards <justfinethanku@gmail.com>
…raphics (NateBJones-Projects#85)

* [recipes] Infographic Generator: turn research docs into visual infographics

Second recipe from @jaredirish. Part of the Open Brain Flywheel
(capture-process-visualize loop, see Issue NateBJones-Projects#84).

Takes any markdown doc or Open Brain thought cluster and generates
professional infographic images via Gemini's free-tier API.
Auto-chunks content, writes verbose prompts (300+ words each),
generates PNGs with specific colors/layout/typography.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [recipes] Fix broken relative links in infographic-generator README

../brain-dump-processor/ → ../panning-for-gold/
../auto-capture-protocol/ → ../auto-capture/

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [recipes] Address review feedback on infographic generator

- Sync generate.py with working local version (cleaner error handling,
  fix --redo display counter bug)
- Fix auto-capture link: directory doesn't exist until PR NateBJones-Projects#42 merges,
  so link to the PR instead of a non-existent directory

Note: part.as_image() and gemini-2.5-flash-image are both valid per
the official google-genai SDK docs. Reviewer concerns on those were
based on outdated information.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* [recipes] Fix infographic redo progress output

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Co-authored-by: Jonathan Edwards <justfinethanku@gmail.com>
* [recipes] Add OB-Graph knowledge graph layer

Adds graph database functionality for Open Brain using PostgreSQL nodes + edges
with recursive CTE traversal. Includes schema, MCP server with 10 tools, and
setup documentation.

https://claude.ai/code/session_015Z8wCeokTMTdrVMthqzGKJ

* [recipes] Clarify OB-Graph deployment setup

---------

Co-authored-by: Claude <noreply@anthropic.com>
* [docs] Fix Cursor MCP connection — use native url field, not mcp-remote

mcp-remote@latest now attempts OAuth client registration before sending
custom headers, which breaks against Open Brain's simple key-based auth.
Cursor supports remote MCP servers natively via the url field, so
mcp-remote is unnecessary.

Changes:
- Add dedicated Cursor section to getting-started guide (7.5) and
  remote-mcp primitive with native url config
- Update mcp-remote examples to pass key via ?key= query parameter
  instead of --header to avoid OAuth discovery issues
- Clarify x-brain-key (core) vs x-access-key (extensions) in
  troubleshooting guides

Made-with: Cursor

* [primitives] Bring remote MCP docs in line with repo format

---------

Co-authored-by: Jonathan Edwards <justfinethanku@gmail.com>
* [skills] Add weekly signal diff skill pack

* [skills] Fix markdownlint numbering in weekly signal diff
…rojects#181)

* [recipes] Add Bring Your Own Context recipe

* [recipes] Fix markdownlint regression in activation README
* [repo] Sweep fix-now backlog issues

* [docs] Fix setup-guide markdownlint regression
Add structured columns (type, sensitivity_tier, importance, quality_score,
source_type, enriched) to the thoughts table with idempotent DDL. Install
RPCs for full-text search, aggregate statistics, and thought connections.
Part of the OB1 alpha milestone — consolidating ExoCortex features.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
@alanshurafa alanshurafa force-pushed the contrib/alanshurafa/enhanced-thoughts branch from 4cef375 to 50c468c Compare April 18, 2026 00:47
Why: The README claimed defaults (importance=5, quality_score=0.50,
sensitivity_tier='normal') that disagreed with schema.sql's actual
values (3, 50, 'standard'). The 'normal' tier would have broken every
other contribution in the repo that expects 'standard'. The SQL is
authoritative -- update the README to match. Also fix the ranking
formula's coalesce fallback (quality_score used 0.50 while the column
is 0..100) so NULL rows don't get a near-zero rank bonus.
Why: Two of three RPCs are SECURITY DEFINER and all three were granted
to anon -- which turns the publishable anon key into a universal read
handle over the entire thoughts table, inverting Open Brain's stock
RLS-behind-service_role posture. Restrict EXECUTE to authenticated
and service_role. Keep SECURITY DEFINER with SET search_path = public
(defense-in-depth against search-path hijacks). Document the security
posture in the README so anyone who wants public read can opt in
explicitly rather than inherit it silently.
Why: `t.id NOT IN (SELECT hit_id ...)` has NULL-unsafe semantics -- if
the subquery ever yields a NULL, the predicate becomes NULL (not true)
and the row is silently filtered out. In this schema the PK is NOT
NULL so the bug cannot fire today, but NOT EXISTS is the correct
discipline and usually plans better for anti-joins.
Why: search_thoughts_text was VOLATILE and get_thought_connections had
no volatility declared (defaults to VOLATILE). Both are pure readers
over their inputs within a transaction -- they touch no sequences,
write no rows, and do not depend on now() for results. Marking them
STABLE unlocks planner optimizations (function inlining, CSE,
index-only scans when used in predicates) and keeps PostgREST calls
fast under dashboard load.
Why: The inline backfill hard-coded an 8-value type allowlist
(idea/task/person_note/reference/decision/lesson/meeting/journal) and
silently discarded every other value. Users with brains that already
use 'article', 'quote', 'bookmark', etc. would run the migration,
see the README promise a backfill, and get NULL on all their rows
with no warning. Wrap the backfill in backfill_thought_types(
p_allowed_types TEXT[]) with the canonical 8 as the default, so
paste-and-run keeps working while power users can override the list
(or pass NULL to accept any value). Document the knob in the README
and update Troubleshooting to point at it.
Why: get_thought_connections used `bt.sensitivity_tier != 'restricted'`
which evaluates to NULL (not true) when the column is NULL, silently
dropping rows. brain_stats_aggregate already uses the NULL-safe
`IS DISTINCT FROM 'restricted'`. Match that pattern so both RPCs see
the same set of rows.
Why: The `updated` field in metadata.json is a signal for downstream
consumers that the file has been revised. Since this commit chain
adds security, correctness, and configurability changes, bump the
date from 2026-04-06 to the current 2026-04-17 so anyone reading
the metadata can see the contribution was recently touched.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Projects

None yet

Development

Successfully merging this pull request may close these issues.