Skip to content
View aleponce4's full-sized avatar
4 followers · 0 following

Highlights

  • Pro

Block or report aleponce4

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse

Pinned Loading

  1. rnaseq-nfcore-wrapper-alphavirus rnaseq-nfcore-wrapper-alphavirus Public

    SLURM execution wrapper and configuration layer for nf-core/rnaseq used in viral RNA-seq projects.

    Python 1

  2. alphavirus-variant-analysis-workflow alphavirus-variant-analysis-workflow Public

    Workflow for intrahost viral variant analysis using LoFreq and iVar.

    Jupyter Notebook

  3. hantavirus-ngs-workflow hantavirus-ngs-workflow Public

    Bioinformatics pipeline for processing Hantavirus NGS data with a two-pass approach. Implements quality control, reference-based mapping, metaconsensus refinement, variant calling, and automatic ne…

    Python

  4. libs-spectroscopy-workbench libs-spectroscopy-workbench Public

    Python-based software for controlling ocean optic spectrometers and analyzing Laser Induced Breakdown Spectroscopy (LIBS) data. Features GUI via tkinter. Processes CSV LIBS files, generates plots, …

    Python 12 3

  5. preclinical-study-analysis-shiny preclinical-study-analysis-shiny Public

    R/Shiny app for longitudinal mouse study visualization and export from spreadsheet inputs.

    R

  6. lab-bioinfo-templates lab-bioinfo-templates Public

    Jonsson Lab reusable bioinformatics analysis templates + Quarto gallery site

    Jupyter Notebook