Automated Tests for Galaxy on Kubernetes Stacks

Galaxy on GKE deployed via GalaxyKubeMan (AnVIL)

Deployment Testing

Twice a day, GalaxyKubeMan (GKM) is deployed on GKE, mimicking an AnVIL deployment. The purpose of these tests is to provide reasonable confidence that Galaxy is launchable on the AnVIL everyday.

Below is a plot summarizing successful deployments and GKM install times. Click here or on the image for more details.

Tool Testing

After each successful deployment, automated tool tests are also run against the instance. These serve as an end-to-end-like test for Galaxy, providing confidence that Galaxy is not only launchable but functional. These tests cycle on a weekly basis through the entire suite of tools installed by default on AnVIL, providing reasonable confidence that the tools encountered by most users remain functional, and automating the detection and reporting of tools breaking.

Latest tool tests for each chunk:

Chunk ID	Tool List	Latest report	Previous report
0	Toolset	Mon Jan 26 01:12:54 2026	Mon Jan 19 01:12:14 2026
1	Toolset	Mon Jan 26 13:15:08 2026	Mon Jan 19 13:19:18 2026
2	Toolset	Tue Jan 20 01:07:13 2026	Tue Jan 13 01:01:55 2026
3	Toolset	Tue Jan 20 13:15:24 2026	Tue Jan 13 13:11:04 2026
4	Toolset	Wed Jan 21 01:10:52 2026	Wed Jan 07 01:04:41 2026
5	Toolset	Wed Jan 21 13:15:07 2026	Wed Jan 07 13:09:19 2026
6	Toolset	Thu Jan 22 01:08:18 2026	Thu Jan 15 01:05:56 2026
7	Toolset	Thu Jan 22 13:15:42 2026	Thu Jan 15 13:12:06 2026
8	Toolset	Fri Jan 23 01:14:14 2026	Fri Jan 16 01:10:04 2026
9	Toolset	Fri Jan 23 13:15:12 2026	Fri Jan 16 13:12:34 2026
10	Toolset	Sat Jan 24 01:10:04 2026	Sat Jan 17 01:05:56 2026
11	Toolset	Sat Jan 24 13:05:19 2026	Sat Jan 17 13:04:57 2026
12	Toolset	Sun Jan 25 01:14:35 2026	Sun Jan 18 01:14:03 2026
13	Toolset	Sun Jan 25 13:08:52 2026	Sun Jan 18 13:03:47 2026