Pinned Loading

1. FStitch FStitch Public

   An algorithm to detect nascent RNA transcription in GRO-seq and ChIP-seq

   C++ 8 6

2. MDS MDS Public

   Algorithms required to compute Motif Displacement Scores

   C++ 1 1

3. motif_displacement_analysis motif_displacement_analysis Public

   A Python package for visualizing and exploring MD score computations

   Jupyter Notebook 2

4. Tfit Tfit Public

   Transcription fit (Tfit) utilizes a generative model of RNA Polymerase to identify sites of divergent transcription in assays like GRO-seq, PRO-seq and GRO-cap

   C++ 8 4

5. pyD3 pyD3 Public

   A python plotting library for D3/HTML export

   Python 3

6. PWM_logo PWM_logo Public

   Display Logo of Position Weight Matrices in Python

   Python 7 1