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  1. ebi-gene-expression-group/scxa-tertiary-workflow ebi-gene-expression-group/scxa-tertiary-workflow Public

    Tertiary component for SCXA workflows

    Nextflow 1 1

  2. bio-info-guy.github.io bio-info-guy.github.io Public

    JavaScript

  3. drug_sensitivity_mlpred drug_sensitivity_mlpred Public

    Jupyter Notebook

  4. pertTF pertTF Public

    Forked from davidliwei/pertTF

    Transformer model with single-cell perturbation predictions

    Python

  5. SingleCellLatentModels SingleCellLatentModels Public

    deprecated python notebook for deep single cell latent models: vae, iwae, betaVAE, factorVAE; with options for library size estimation and removal of batch effects

    Jupyter Notebook

  6. scFoundationFlash scFoundationFlash Public

    Forked from biomap-research/scFoundation

    scFoundation with flash attention enabled and faster GEARS

    Jupyter Notebook