Imada_FastingCancer

Processing and Analysis of scRNA-Seq data for Imada fasting cancer Publication

R object of processed data and count matricies are available here:

docker://bumproo/seurat3_r403esc101

Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
.Rproj.user		.Rproj.user
gsea		gsea
.Rhistory		.Rhistory
061324_sessionInfo.txt		061324_sessionInfo.txt
2021_sessionInfo.txt		2021_sessionInfo.txt
2024_sessionInfo.txt		2024_sessionInfo.txt
Imada_FastingCancer.Rmd		Imada_FastingCancer.Rmd
Imada_FastingCancer.Rproj		Imada_FastingCancer.Rproj
Imada_FastingCancer.html		Imada_FastingCancer.html
Imada_FastingCancer.nb.html		Imada_FastingCancer.nb.html
Munoz_Yilmaz_CellCycle_signatures.gmx		Munoz_Yilmaz_CellCycle_signatures.gmx
Munoz_Yilmaz_CellCycle_signatures.xlsx		Munoz_Yilmaz_CellCycle_signatures.xlsx
README.md		README.md
al10_v_al2.rnk		al10_v_al2.rnk
al10_v_al5.rnk		al10_v_al5.rnk
al5_v_al2.rnk		al5_v_al2.rnk
cluster_2_5_10stem_gsea.xlsx		cluster_2_5_10stem_gsea.xlsx
mm_prerank_4.sh		mm_prerank_4.sh
singularity_Rstudio_r403.sh		singularity_Rstudio_r403.sh