To support Haw et al, PNAS 2020

To reproduce results for

Strong spatial embedding of social networks generates non-standard epidemic dynamics independent of degree distribution and clustering

PNAS 2020

David J. Haw, Rachael Pung, Jonathan M. Read, Steven Riley

Please also contact David Haw on djhaw@live.co.uk or Steven Riley on sr@stevenriley.net to check if there is an updated version of these scripts merged into more recent versions of the network generation code.

.Rdata files contain all networks used for the study. These can be generated in the scenarios/ebola directory, but are provided here for convenience. The README.md in the root directory explains how to use the R and matlab code.

Resubmission of subexp paper

This is to accompany the resubmission of a manuscript to PNAS