Hi, I have followed the installation and the code runs for the demo data. Now I am trying to run the code on a different dataset, but encounter the following issue, with the code crashing.
Prepare data for neural network...
/mnt/HDD3/Helen/anaconda3/envs/SCS/lib/python3.9/site-packages/anndata/_core/anndata.py:121: ImplicitModificationWarning:
Transforming to str index.
/mnt/HDD3/Helen/anaconda3/envs/SCS/lib/python3.9/site-packages/anndata/_core/anndata.py:121: ImplicitModificationWarning:
Transforming to str index.
Segmentation fault (core dumped)
I've tried to reduce the patch size (down to 100). Do you have any suggestions on what might be causing the issue and how to resolve it? Thanks!
Hi, I have followed the installation and the code runs for the demo data. Now I am trying to run the code on a different dataset, but encounter the following issue, with the code crashing.
I've tried to reduce the patch size (down to 100). Do you have any suggestions on what might be causing the issue and how to resolve it? Thanks!