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RWE Prototype

This repository is a project blueprint for transforming Real-World Data (RWD) into Real-World Evidence (RWE) using an R-based reproducible pipeline.

Quick start

  1. Put your raw data in data/raw/ (CSV, parquet, or your preferred format).
  2. Edit metadata YAML files in metadata/ to declare domains, cohort and analysis rules.
  3. Source package config and run the targets pipeline:
source("config/_packages.R")
targets::tar_make()
  1. Render the report at reports/rwe_report.qmd after the pipeline completes.

Folder overview

  • config/ - package loader and global options
  • data/raw/ - raw RWD inputs
  • data/interim/ - standardized SDTM-lite datasets (parquet)
  • data/processed/ - analysis-ready datasets
  • metadata/ - YAML specifications & mapping files
  • R/ - R functions and pipeline components
  • checks/ - QC rules and tests
  • reports/ - Quarto report and figures
  • app/ - optional Shiny app

License and contribution

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