Folder Structure Explanation

Basic File Structure:

└── locomotion-analysis/
  ├── Sample_data/
  │   ├──Group_Results/
  │   │   ├── animal_ANOVA_results.csv
  │   │   ├── animal_non_normal_stats.csv
  │   │   ├── animal_normal_stats.csv
  │   │   ├── ANOVA_results.csv
  │   │   ├── non_normal_stats.csv
  │   │   ├── normal_stats.csv
  │   ├── V3Off_Levelwalk/
  │   │   ├── phase [files containing swing and stance times]
  │   │   ├── smr [original data split into one trial per file]
  │   │   └── h5 [files used for cycle information]
  │   ├── WT_Levelwalk/
  │   │   ├──phase
  │   │   ├── smr
  │   │   └── h5
  │   ├──animal_avg_&_stdv.csv
  │   └──step_table.csv
  ├── Scripts/
  │   ├── animal_avgs.py [computes animal level avgs & stdv]
  │   ├── batch_convert.py [all files in a directory converted from smr to h5]
  │   ├── convert_to_h5.py [script run by batch_convert.py]
  │   ├── group_comparison.py [calculates group comparison statistics for cycle level stats]
  │   ├── naming.yaml [used by convert_to_h5.py for channel names]
  │   ├── run_everything.py [generates step table & runs statistical analysis]
  │   ├── segmental_calc.py [generates segmental angles]
  │   ├── step_table_initialize.py [generates step table, uses stepwise_data_calc.py functions]
  │   ├── stepwise_data_calc.py [has functions that are called by step_table_initialize.py]
  │   ├── useful_imports.py [functions imported by multiple scripts]
  │   ├── visualize_ankle_angle.py [currently just a graphing function]
  ├── License
  └── Readme.md

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