Better fix deadlock#83
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StrappazzonHugo wants to merge 5 commits intomainfrom
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* fix hatch flags (#84) * version bump (#85) * tag0.0.8 (#86) * version bump * update lock * fix packaging (#87) * Added support to save arrays to HDF5 files from DeisaArrays (#67) * Merge current main to feat(to_hdf5): Added to_hdf5 method to DeisaArray * update(to_hdf5): Using oly delayed, don't relying on map_blocks. * Saving with hdf5 tests * zarr_tests * Code quality * Very simple wrapper to dask.to_zarr * Merged to current main: Using pathlib for managing chunks filename * Cleaning and code quality * Merged saving tests in one single file - One file for all tests - Using now DeisaArray.to_zarr * Added zarr and h5py to pyptoject.toml * Handles relative path when saving * Saving tests with relative path * Creating VDS without needing to wait for all tasks. Currently not working with distributed scheduler... * Commented tests for distributed scheduler * going back to dask.delayed instead of amp.blocks * Code quality * Working with distributed and updated tests * update lock * Component name as parameter in to_hdf5 * Separated to_hdf5 from DeisaArray to enable saving of multiple arrays to same file * Created tests for saving multiple arrays to same file * Test several timesteps for one single file. * Include remaining to_zarr arguments in function wrapper * Added test for saving to netcdf with xarray * release (0.0.7) (#82) * fix hatch flags (#84) * version bump (#85) * tag0.0.8 (#86) * version bump * update lock * fix packaging (#87) * code quality * update lock --------- Co-authored-by: Hugo Strappazzon <113433073+StrappazzonHugo@users.noreply.github.com> Co-authored-by: Andres Bermeo Marinelli <72303015+theabm@users.noreply.github.com> * fname -> full_name (#88) * docs, stability, tests (#89) * list,ndarray->tuple conversion * increase timeout * return timestep and log * better docs * mpicomm + testing * add add_chunk * add mpi4py as optional dep * container + mpi * dep groups + fix sphinx namespace * remove bare except * 40 min * accept raw mpi comm * format * fix tests for CI * DistNetworkError, DistStoreError --------- Co-authored-by: Andres Bermeo Marinelli <72303015+theabm@users.noreply.github.com> Co-authored-by: Raddatz! <rayandematos@gmail.com>
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