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@dms-vep

dms-vep

Deep mutational scanning of viral entry proteins by the Bloom lab

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  1. SARS-CoV-2_XBB.1.5_spike_DMS SARS-CoV-2_XBB.1.5_spike_DMS Public

    Jupyter Notebook 6 1

  2. dms-vep-pipeline-3 dms-vep-pipeline-3 Public

    Pipeline for analyzing deep mutational scanning (DMS) of viral entry proteins (VEPs)

    Jupyter Notebook 6 2

  3. dms-vep-pipeline dms-vep-pipeline Public

    Pipeline for analyzing deep mutational scanning (DMS) of viral entry proteins (VEPs)

    Jupyter Notebook 4 2

  4. SARS-CoV-2_Delta_spike_DMS_REGN10933 SARS-CoV-2_Delta_spike_DMS_REGN10933 Public

    Deep mutational scanning of SARS-CoV-2 Delta spike against REGN10933

    HTML 3

  5. SARS-CoV-2_Omicron_BA.2_spike_DMS SARS-CoV-2_Omicron_BA.2_spike_DMS Public

    Jupyter Notebook 2

  6. SARS-CoV-2_Omicron_BA.1_spike_DMS_mAbs SARS-CoV-2_Omicron_BA.1_spike_DMS_mAbs Public

    Deep mutational scanning of SARS-CoV-2 Omicron BA.1 spike against RBD, NTD, and S2 antibodies

    Jupyter Notebook 2 2

Repositories

Showing 10 of 46 repositories
  • RSV_Long_F_DMS Public

    Pseudovirus deep mutational scanning of the F protein from RSV (subtype A Long strain)

    dms-vep/RSV_Long_F_DMS’s past year of commit activity
    Jupyter Notebook 0 MIT 0 1 0 Updated Feb 13, 2026
  • dms-vep-pipeline-3 Public

    Pipeline for analyzing deep mutational scanning (DMS) of viral entry proteins (VEPs)

    dms-vep/dms-vep-pipeline-3’s past year of commit activity
    Jupyter Notebook 6 2 4 0 Updated Feb 12, 2026
  • Flu_H7_Anhui13_DMS Public

    Pseudovirus deep mutational scanning of the hemagglutinin from influenza strain A/Anhui/1/2013 (H7N9)

    dms-vep/Flu_H7_Anhui13_DMS’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Feb 6, 2026
  • 229E_spike_1984_DMS Public

    229E spike protein DMS analysis

    dms-vep/229E_spike_1984_DMS’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jan 31, 2026
  • SARS-CoV-2_Omicron_BA.2_spike_DMS_Crowe_mAbs Public
    dms-vep/SARS-CoV-2_Omicron_BA.2_spike_DMS_Crowe_mAbs’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 13, 2026
  • Nipah_Malaysia_F_DMS Public

    Deep mutational scanning of the Nipah virus fusion protein

    dms-vep/Nipah_Malaysia_F_DMS’s past year of commit activity
    HTML 0 0 0 0 Updated Dec 9, 2025
  • Flu_H3_Massachusetts2022_DMS Public

    Deep mutational scanning of A/Massachusetts/18/2022 HA.

    dms-vep/Flu_H3_Massachusetts2022_DMS’s past year of commit activity
    HTML 2 1 1 0 Updated Dec 2, 2025
  • SARS-CoV-2_XBB.1.5_spike_DMS_NIH_Penn_mAbs Public
    dms-vep/SARS-CoV-2_XBB.1.5_spike_DMS_NIH_Penn_mAbs’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 29, 2025
  • Nipah_Malaysia_RBP_DMS Public

    Analysis of DMS data on Nipah RBP using dms-vep-pipeline-3

    dms-vep/Nipah_Malaysia_RBP_DMS’s past year of commit activity
    HTML 2 0 0 0 Updated Nov 7, 2025
  • CHIKV-181-25-E-DMS Public

    Pseudovirus deep mutational scanning of the CHIKV envelope proteins

    dms-vep/CHIKV-181-25-E-DMS’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Nov 7, 2025
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