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create xmatrix and other issues

Status: Open.

#18 In eudoraleer/scasa;

· JFerrer-B opened on Jun 3, 2025

Using Drosophila scRNAseq doesn't work.

Status: Open.

#17 In eudoraleer/scasa;

· enguyen117 opened on Oct 18, 2024

Row names with multiple transcripts

Status: Open.

#16 In eudoraleer/scasa;

· Stephen1202-Wang opened on Jul 25, 2024

my $scasa_dir = <code>which scasa</code>;

Status: Open.

#15 In eudoraleer/scasa;

· nick-youngblut opened on Jun 27, 2024

mkdir: cannot create directory ‘.//SCASA_My_Project_20240627144303/’: File exists

Status: Open.

#14 In eudoraleer/scasa;

· nick-youngblut opened on Jun 27, 2024

scasa cli docs: currently scasa only supports hg38

Status: Open.

#13 In eudoraleer/scasa;

· nick-youngblut opened on Jun 27, 2024

fail in docker: Total 0 white-listed Barcodes

Status: Open.

#11 In eudoraleer/scasa;

· LinAU opened on Mar 18, 2024

Using your tool for single cell data barcoded with split-seq technology and not droplet based

Status: Open.

#10 In eudoraleer/scasa;

· vasikara17 opened on Mar 1, 2024

Smart-seq2 full length RNA-seq data

Status: Open.

#9 In eudoraleer/scasa;

· seongguheo opened on Apr 14, 2023

So many Error messages: please help

Status: Open.

#8 In eudoraleer/scasa;

· RenaeAtkinson opened on Apr 14, 2023

Scasa:v1.0.1 docker shows error

Status: Open.

#6 In eudoraleer/scasa;

· raghuvanshi-rajesh opened on Mar 22, 2023

Alevin Failed

Status: Open.

#5 In eudoraleer/scasa;

· SoberDog opened on Oct 14, 2022