GitHub - gagelo01/Brain_pQTL: This repo contains the code, but not the data, to reproduce the analysis of the paper "Genetic control of body weight by the human brain proteome", by Gagnon E et al.

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Name		Name	Last commit message	Last commit date
Latest commit History 52 Commits
2a_run_all_pqtl_analysis.R		2a_run_all_pqtl_analysis.R
2b_extract_sign.R		2b_extract_sign.R
2c_GTEX_vcf.R		2c_GTEX_vcf.R
2d_create_dt_tra.R		2d_create_dt_tra.R
3b_computehyprcoloc.R		3b_computehyprcoloc.R
3c_vep.R		3c_vep.R
3c_vep.sh		3c_vep.sh
3d_ztest_ukb_giant.R		3d_ztest_ukb_giant.R
4a_specificity_replication.R		4a_specificity_replication.R
4b_tissular_specificity.R		4b_tissular_specificity.R
4d_gaininginsightsintoproteins.R		4d_gaininginsightsintoproteins.R
5a_plot_all_figures.R		5a_plot_all_figures.R
5f_PhenoGram.R		5f_PhenoGram.R
5g_create_tables.R		5g_create_tables.R
5h_textresults.R		5h_textresults.R
CMplot_eloi.R		CMplot_eloi.R
masterscript.sh		masterscript.sh
run_all_pqtl_analyses_rosmap_banner.R		run_all_pqtl_analyses_rosmap_banner.R

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This repo contains the code, but not the data, to reproduce the analysis of the paper "Genetic control of body weight by the human brain proteome", by Gagnon E et al.