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1. Getting started
Max Brown edited this page Jul 1, 2022
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Probably easiest to grab from conda:
# version 0.1.55
conda install -c bioconda goatGet the latest release by using the commands below.
# for mac
curl -L "https://github.com/genomehubs/goat-cli/releases/download/0.2.0/goat_mac_0.2.0" > goat-cli && chmod +x goat-cli
# and linux (ubuntu)
curl -L "https://github.com/genomehubs/goat-cli/releases/download/0.1.55/goat_ubuntu_0.2.0" > goat-cli && chmod +x goat-cliIf you have the rust toolchain installed:
# 0.2.0
cargo install goat-cliFirst download Rust if you haven't already (why not?!). goat-cli should work on the most up to date version of Rust.
curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | shThen clone this repo, and build.
git clone https://github.com/genomehubs/goat-cli
cd goat-cli && cargo build --release
# executable is in ./target/release/goat
./target/release/goat search --help
# or to install into your path
cd goat-cli && cargo install --path .
# type goat-cli!
# should be version 0.2.0
goat-cli