Various scripts for data retrieval and preprocessing from public data bases. This first version includes scripts to:
- Perform several Gene Set Enrichment Analysis simultaneously. Obtained and adapted from the Broad Institute manual.
- Merge GSEA results tsv files from different comparisons. Useful for further plotting.
- Check and count that all the analysis performed for the comparisons share the same gene sets.
- Retrieve grp files of selected gene sets from the Molecular Signatures Database (MSigDB).
- Combine every gene from each gene set into one file. Useful for screening of genes of interest.