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@ghruproject

Global Health Research Unit - Genomic Surveillance of Antimicrobial Resistance

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  1. bactscout bactscout Public

    BactScout is a high-performance Python pipeline for rapid quality assessment, taxonomic profiling, and MLST-based quality control of bacterial sequencing data.

    Python 3 1

  2. GHRU-assembly GHRU-assembly Public

    Nextflow 2

  3. GenepiK GenepiK Public

    An R package to perform genomics epidemiology

    HTML

  4. qc_assembly_notebook qc_assembly_notebook Public

    Jupyter Notebook

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