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added basic sourceing of seadas env setup before running commands. #60

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added basic sourceing of seadas env setup before running commands. #60

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21 changes: 15 additions & 6 deletions bin/terra_and_aqua_l1.rb
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Original file line number Diff line number Diff line change
Expand Up @@ -29,10 +29,10 @@ def execute
exit_with_error("too many/not enough pds files => #{pds.join(' ')}", 11) if (pds.length != 1)

# update luts
shell_out!(conf['processing'][platform]['update_luts']) if conf['processing'][platform]['update_luts']
shell_out_seadas(conf['processing'][platform]['update_luts'], conf) if conf['processing'][platform]['update_luts']

# To l1
shell_out!("#{conf['processing'][platform]['l1_driver']} #{pds.first}")
shell_out_seadas("#{conf['processing'][platform]['l1_driver']} #{pds.first}",conf)

# find L1A_LAC
rLACs = Dir.glob('[AT]*L1A_LAC')
Expand All @@ -41,10 +41,10 @@ def execute
end

# perform gbad processing, if needed
shell_out!(conf['processing'][platform]['gbad']) if (conf['processing'][platform]['gbad'])
shell_out_seadas(conf['processing'][platform]['gbad'], conf) if (conf['processing'][platform]['gbad'])

# geo processing
shell_out!("#{conf['processing'][platform]['geo_driver']} #{rLACs.first}")
shell_out_seadas("#{conf['processing'][platform]['geo_driver']} #{rLACs.first}", conf)

# find GEOs
rGEOs = Dir.glob('[AT]*GEO')
Expand All @@ -53,7 +53,7 @@ def execute
end

# L1B processing
shell_out!("#{conf['processing'][platform]['l1b_driver']} #{rLACs.first} #{rGEOs.first}")
shell_out_seadas("#{conf['processing'][platform]['l1b_driver']} #{rLACs.first} #{rGEOs.first}", conf)

# find L1B_LAC
rL1B_LACs = Dir.glob('[AT]*L1B_LAC')
Expand All @@ -62,7 +62,7 @@ def execute
end

# perform destriping, if needed
shell_out!("#{conf['processing'][platform]['destripe']} #{rL1B_LACs.first}") if (conf['processing'][platform]['destripe'])
shell_out_seadas("#{conf['processing'][platform]['destripe']} #{rL1B_LACs.first}", conf) if (conf['processing'][platform]['destripe'])

gina_name = get_gina_name(rL1B_LACs.first, platform, get_l1_time(rGEOs.first))

Expand Down Expand Up @@ -104,6 +104,15 @@ def get_gina_name(item, platform, pass_tm)
platform + '.' + pass_tm.strftime('%y%j.%H%M')
end

#sources "modis_tools_setup" before running the command to setup the environment.
def shell_out_seadas(cmd, cfg)
if cfg["modis_tools_setup"]
shell_out!(". #{cfg["modis_tools_setup"]} ; #{cmd}")
else
shell_out!(cfg)
end
end

end

ModisL1Clamp.run