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Fixes NameError exception while guessing file type#331
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m-novikov wants to merge 1 commit intoilastik:masterfrom
Open
Fixes NameError exception while guessing file type#331m-novikov wants to merge 1 commit intoilastik:masterfrom
m-novikov wants to merge 1 commit intoilastik:masterfrom
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Reproducible by opening n5 directory without n5 extension and if quilted
is not installed
ERROR 2019-12-23 14:51:40,501 log_exception 19155 140465532311360 Traceback (most recent call last):
File "ilastik-project/ilastik/ilastik/applets/dataSelection/dataSelectionGui.py", line 408, in addFileNames
new_infos = self._createDatasetInfos(roleIndex, paths)
File "ilastik-project/ilastik/ilastik/applets/dataSelection/dataSelectionGui.py", line 529, in _createDatasetInfos
info = self._createDatasetInfo(roleIndex, filePath, roi)
File "ilastik-project/ilastik/ilastik/applets/dataSelection/dataSelectionGui.py", line 578, in _createDatasetInfo
subvolume_roi=roi,
File "ilastik-project/ilastik/ilastik/applets/dataSelection/opDataSelection.py", line 538, in create_or_fallback_to_absolute
return cls(*args, **kwargs)
File "ilastik-project/ilastik/ilastik/applets/dataSelection/opDataSelection.py", line 531, in __init__
super().__init__(**fs_info_kwargs)
File "ilastik-project/ilastik/ilastik/applets/dataSelection/opDataSelection.py", line 439, in __init__
graph=Graph(), WorkingDirectory=self.base_dir, FilePath=self.filePath, SequenceAxis=self.sequence_axis
File "ilastik-project/lazyflow/lazyflow/operator.py", line 141, in __call__
instance._after_init()
File "ilastik-project/lazyflow/lazyflow/operator.py", line 304, in _after_init
self._setupOutputs()
File "ilastik-project/lazyflow/lazyflow/operator.py", line 498, in _setupOutputs
self.setupOutputs()
File "ilastik-project/lazyflow/lazyflow/operators/ioOperators/opInputDataReader.py", line 214, in setupOutputs
self.internalOperators, self.internalOutput = openFunc(filePath)
File "ilastik-project/lazyflow/lazyflow/operators/ioOperators/opInputDataReader.py", line 478, in _attemptOpenAsH5BlockStore
op = OpH5BlockStoreReader(parent=self)
NameError: name 'OpH5BlockStoreReader' is not defined
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Reproducible by opening n5 directory without n5 extension and if quilted
is not installed