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安装办法 installation

Status: Open.

#11 In jkobject/geneformer;

· VictoryQin opened on Dec 30, 2025

Unable to fine-tune model with n_hyperopt_trials > 0. cc.validate gets stuck

Status: Open.

#10 In jkobject/geneformer;

· sheyiphunmi opened on Aug 29, 2025

Guidance on speeding up Geneformer ISP on CPU

Status: Open.

#9 In jkobject/geneformer;

· tanasa opened on Aug 28, 2025

95M-token_dictionary.pkl

Status: Open.

#8 In jkobject/geneformer;

· Yanllan opened on Jan 27, 2025

Any plans on upgrading the BERT dependency to ModernBERT?

Status: Open.

#7 In jkobject/geneformer;

· raphael-cohen-immunai opened on Dec 29, 2024

how to find raw data

Status: Open.

#6 In jkobject/geneformer;

· Victor888666 opened on Oct 8, 2024

Tokenizing .loom or .h5ad single cell RNA-seq data to rank value encoding .dataset format meeting quesrion

Status: Open.

#5 In jkobject/geneformer;

· DM0815 opened on Sep 4, 2024

how to install ？

Status: Open.

#4 In jkobject/geneformer;

· noob000007 opened on Aug 28, 2024

how to train a fineturning model?

Status: Open.

#3 In jkobject/geneformer;

· RongqinChen opened on Aug 28, 2024

Creating token dictionary

Status: Open.

#2 In jkobject/geneformer;

· gs512 opened on Jul 2, 2024

pyarrow.lib.ArrowInvalid: Value 2147486084 too large to fit in C integer type`

Status: Open.

#1 In jkobject/geneformer;

· Jiam1ng opened on May 8, 2024