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jscastanoc edited this page Nov 12, 2014 · 7 revisions

Welcome to the NeuroIP wiki!

Required Toolboxes :

toolbox_graph -> http://www.mathworks.com/matlabcentral/fileexchange/5355

Matlab BGL -> http://www.mathworks.com/matlabcentral/fileexchange/10922-matlabbgl

nway(support for PARAFAC) -> http://www.mathworks.com/matlabcentral/fileexchange/1088-the-n-way-toolbox

ltfat (support for Time-Frequency transformations -> http://ltfat.sourceforge.net/

spm (totally optional)-> http://www.fil.ion.ucl.ac.uk/spm/

fieldtrip (only to calculate the forward solution, optional)-> http://fieldtrip.fcdonders.nl/

DAL (for S-FLEX solver) -> http://ttic.uchicago.edu/~ryotat/softwares/dal/

EMD (To calculate the earth mover distance, used in some scripts to get an error measurement) -> http://www.seas.upenn.edu/~ofirpele/FastEMD/code/

There are a couple of scripts for the really extremely new experimental radioactive unpublished stuff. But since a couple of these are not mine and are kind of private, I will not release them for now... SORRY ABOUT THAT!!.

LEAD FIELD DATA

The lead field Matrix was taken from: http://eeg.pl/Members/jarekz/lead-field-data-for-subjects-form-the-paper/view

And was calculated using the Fieltrip toolbox: http://fieldtrip.fcdonders.nl/

Find it here! -> https://mega.co.nz/#F!3ZtGmI4b!ZFiBjm_5rc9M7Po5QEYXDQ

SAMPLE SCRIPTS

test_scripts/Debugged/script_LORETA.m : Example to reconstruct using Minimum Norm-like approaches. You should get the way the toolbox works by looking at it :)

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