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Also addresses issue #156 |
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In this PR:
setAnnotationParam,getAnnotationParams,showGOEvidenceCodes,getGOEvidenceCodes,addGoAnnotations,orderGoAnnotationand associated helper functionsv04-pRoloc-goannotations.Rmdv01-pRoloc-tutorial.Rmdby (1) adding section 4.2 "Euclidean Distance Metrics" i.e. theclustDistframework that was previously in vignette v04, (2) added section 5.2.3 "Class Imbalance", (3) removedphenoDiscoexample