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Generating custom test and training sets for cross-validation by identity

Status: Open.

#65 In limey-bean/Anacapa;

· karinevilleneuve opened on Oct 22, 2024

Runnind using dada2 version 1.22

Status: Open.

#64 In limey-bean/Anacapa;

· Sbu211 opened on Mar 24, 2022

Slightly different taxonomy annotations with 12S example

Status: Open.

#60 In limey-bean/Anacapa;

· gmteunisse opened on Feb 8, 2022

Minor code issues that need fixing to get Anacapa working

Status: Open.

#59 In limey-bean/Anacapa;

· gmteunisse opened on Feb 8, 2022

Anacapa documentation - options for own data

Status: Open.

#57 In limey-bean/Anacapa;

· FabianRoger opened on Apr 1, 2021

using only the taxonomic assignemnt part - help wanted

Status: Open.

#56 In limey-bean/Anacapa;

· FabianRoger opened on Mar 30, 2021

Problem with the dada2 part of the pipeline

Status: Open.

#53 In limey-bean/Anacapa;

· amaeda16 opened on Apr 27, 2020

License

Status: Open.

#51 In limey-bean/Anacapa;

· cghiban opened on Aug 2, 2019

use muscle path from config in /root/Anacapa_db/scripts/blca_from_bowtie.py

Status: Open.

#40 In limey-bean/Anacapa;

· max-mapper opened on Feb 8, 2018

modify QC script to allow unzipped reads

Status: Open.

#36 In limey-bean/Anacapa;

· limey-bean opened on Jan 12, 2018

check config file script?

w2.0 wishlist

Status: Open.

#35 In limey-bean/Anacapa;

· limey-bean opened on Jan 12, 2018

minimal example data

Status: Open.

#10 In limey-bean/Anacapa;

· max-mapper opened on Nov 14, 2017