Explore MISTy and spatial omics techniques applied to MIBI data

Data

Based on currently unpublished data, generated by Sven..

The scripts and notebooks are intended to run with the koalive/morpho-profiling:epsilon docker image.

Name		Name	Last commit message	Last commit date
Latest commit History 4 Commits
ExtractMarkersInNuclei.py		ExtractMarkersInNuclei.py
README.md		README.md
RunMisty.ipynb		RunMisty.ipynb
RunMisty_MesmerOutput.ipynb		RunMisty_MesmerOutput.ipynb
RunUTAG_MesmerOutput.ipynb		RunUTAG_MesmerOutput.ipynb