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@malabz

MALABZ_UESTC

multiple sequence alignment research

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  1. HAlign-2 HAlign-2 Public

    a multiple sequence alignment tool

    HTML 4 4

  2. HAlign-3 HAlign-3 Public

    do multiple nucleotide sequence alignment fast and accurately

    Java 18 3

  3. stmsa-cpp stmsa-cpp Public

    do multiple nucleotide sequence alignment fast and accurately

    C++ 3

  4. WMSA WMSA Public

    The Multiple Sequence Alignment which developed by Wym6912

    C 2 1

  5. MSATOOLS MSATOOLS Public

    C++ 5 3

Repositories

Showing 10 of 52 repositories
  • spscore Public

    A fast, memory-efficient tool to calculate Sum-of-Pairs (SP) scores for Multiple Sequence Alignments (MSA).

    malabz/spscore’s past year of commit activity
    C++ 0 0 0 0 Updated Feb 3, 2026
  • HAlign-4 Public Forked from pinglu-zhang/HAlign-4

    HAlign 4: A New Strategy for Rapidly Aligning Millions of Sequences

    malabz/HAlign-4’s past year of commit activity
    C++ 6 MIT 3 0 0 Updated Feb 1, 2026
  • Cax Public
    malabz/Cax’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Jan 26, 2026
  • FMAlign2 Public Forked from pinglu-zhang/FMAlign2

    FMAlign2: A novel fast multiple nucleotide sequence alignment method for ultra-long datasets

    malabz/FMAlign2’s past year of commit activity
    C++ 8 Apache-2.0 2 0 0 Updated Jan 24, 2026
  • deMEM Public Forked from wym6912/deMEM

    deMEM: a novel divide-and-conquer framework based on de Bruijn graph for scalable multiple sequence alignment

    malabz/deMEM’s past year of commit activity
    C++ 2 MIT 1 0 0 Updated Jan 13, 2026
  • msawebsite Public

    website sources

    malabz/msawebsite’s past year of commit activity
    HTML 0 5 0 0 Updated Jan 6, 2026
  • linearPOA Public Forked from wym6912/linearPOA

    Memory-efficient Partial Order Alignment with linearPOA

    malabz/linearPOA’s past year of commit activity
    C++ 1 1 0 0 Updated Dec 24, 2025
  • HAlign-G Public

    A rapid and low-memory multiple-genome aligner for closely related genomes

    malabz/HAlign-G’s past year of commit activity
    C++ 22 MIT 1 0 0 Updated Sep 3, 2025
  • MSAvc Public
    malabz/MSAvc’s past year of commit activity
    C++ 1 MIT 1 0 0 Updated Jul 1, 2025
  • ReAlign-P Public

    🧬ReAlign-P: A vertical iterative realignment method for protein multiple sequence alignment

    malabz/ReAlign-P’s past year of commit activity
    C++ 1 MIT 0 0 0 Updated Jun 27, 2025
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