Bridging Bioconductor to other bioinformatics tools using CWL

The goal of BioC19CWL is to ...

System dependencies

• cwltool

A python package cwltool is required to be installed. The cwltool is the reference implementation of the Common Workflow Language, which is used to run the CWL scripts. Here is the instruction to install the tool. https://github.com/common-workflow-language/cwltool#install

• Docker

The Docker engine requirement is optional, but it can simplify software installation and management.