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fix environemnt problems #21

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Merged
mjemons merged 1 commit into from
Oct 28, 2025
Merged

fix environemnt problems #21

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6 changes: 3 additions & 3 deletions R/spatialInference.R
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Original file line number Diff line number Diff line change
Expand Up @@ -197,13 +197,13 @@ spatialInference <- function(spe,
colnames(mm) <- gsub("-","_", colnames(mm))
#create a formula without the first intercept column
formula <- stats::as.formula(paste("Y ~", paste(colnames(mm)[c(-1)],
collapse="+")))
collapse="+")), env = emptyenv())

if(!is.null(sample_id)){
formula <- stats::as.formula(paste("Y ~",
paste(c(colnames(mm)[c(-1)],
paste0("s(",sample_id,", bs = 're')")),
collapse="+")))
collapse="+")), env = emptyenv())
}

#due to the removal of delta, rSeq can be less as well
Expand Down Expand Up @@ -440,7 +440,7 @@ exchangeSplineBasis <- function(mdl, var, bs){
formulaVars <- formula.tools::rhs.vars(mdl$formula)
formulaVars[1] <- newIntercept

newFormula <- stats::as.formula(paste("Y ~ ", paste(formulaVars, collapse = "+")))
newFormula <- stats::as.formula(paste("Y ~ ", paste(formulaVars, collapse = "+")), env = emptyenv())

return(newFormula)
}