Feature anj#3

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anjag01 wants to merge 150 commits intoncbender:feature_Nilsfrom

anjag01:feature_anj

Commits on Oct 30, 2023

fix error in concatenation
cbielow
committed

Commits on Nov 29, 2024

Merge branch 'develop' of https://github.com/OpenMS/OpenMS into develop
cbielow
committed

Commits on Feb 17, 2025

Merge branch 'develop' of https://github.com/OpenMS/OpenMS into develop
cbielow
committed

Commits on Feb 21, 2025

Merge branch 'develop' of https://github.com/OpenMS/OpenMS into develop
cbielow
committed

Commits on Mar 19, 2025

changed minimum header size
subCode321
committed

Commits on Mar 25, 2025

[MSNumpressCoder]Refactoring: move implementation from header to cpp (#7934)
moabo3li
authored

Commits on Mar 26, 2025

Commits on Mar 27, 2025

Fix deb dependencies (#7943)
poshul
authored

Commits on Apr 1, 2025

DOC: Minor update to OSW TOPP doc (#7956)
singjc
authored

Commits on Apr 3, 2025

improve compatibility with mzTabM standard (#7958)
timosachsenberg
authored

Commits on Apr 7, 2025

FastaFile cannot start with an empty line (#7960)
ChandraDevs1
authored

Commits on Apr 9, 2025

changed implementation
subCode321
committed

Commits on Apr 11, 2025

Merge branch 'develop' into alignwork
subCode321
authored

Commits on Apr 15, 2025

Enable OpenMP for pyOpenMS on MacOS (#7980)
t0mdavid-m
authored

Commits on Apr 16, 2025

Commits on Apr 17, 2025

Update THIRDPARTY and lay groundwork for linux ARM support (#7811)
poshul
authored

Commits on Apr 22, 2025

Commits on Apr 23, 2025

Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
Deleted redundant test1.cpp
Anjali Gajurel
committed
comment
Anjali Gajurel
committed
Merge branch 'develop' of https://github.com/OpenMS/OpenMS into develop
cbielow
committed
exclude dll from pre 3.4 installer causing cxxframehandler errors when running TOPP executables on Win10
cbielow
committed

Commits on Apr 25, 2025

Commits on Apr 26, 2025

Merge pull request #8001 from cbielow/fix_dll_install
cbielow
authored
fhf
Anjali Gajurel
committed
fhf
Anjali Gajurel
committed
Work in progress before pulling
Anjali Gajurel
committed

Commits on Apr 28, 2025

My changes for the PR
Anjali Gajurel
committed
My changes for the PR
Anjali Gajurel
committed
My changes for the PR
Anjali Gajurel
committed
My changes for the PR
Anjali Gajurel
committed
[TEST] Make the BilinearInterpolation test deterministic (#8000)
pjones
authored
My changes for the PR
Anjali Gajurel
committed
Update openms_ci_matrix_full.yml (#8003)
poshul
authored
My changes for the PR
Anjali Gajurel
committed
My changes for the PR
Anjali Gajurel
committed
My changes for the PR
Anjali Gajurel
committed
Merge branch 'develop' into installer_dll_fix
jpfeuffer
authored
Merge pull request #7996 from cbielow/installer_dll_fix
jpfeuffer
authored
My changes for the PR
Anjali Gajurel
committed
My changes for the PR
Anjali Gajurel
committed
My changes for the PR
Anjali Gajurel
committed

Commits on Apr 29, 2025

co
Anjali Gajurel
committed
Merge remote-tracking branch 'upstream/develop' into develop
Anjali Gajurel
committed

Commits on Apr 30, 2025

recent changes
Anjali Gajurel
committed
two-phase writing
Anjali Gajurel
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w/o temp buffer
Anjali Gajurel
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no writeIndex
Anjali Gajurel
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added is_buffer
Anjali Gajurel
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backtotempbuffer
Anjali Gajurel
committed
used tempfile in storebuffer function
Anjali Gajurel
committed
reverted changes in storeBuffer
Anjali Gajurel
committed
Merge branch 'develop' of https://github.com/anjag01/OpenMS into develop
Anjali Gajurel
committed

Commits on May 2, 2025

on-the-fly compression
Anjali Gajurel
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pointer
Anjali Gajurel
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no pointer
Anjali Gajurel
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debug in test file
Anjali Gajurel
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counter
Anjali Gajurel
committed
offsets in writeTo
Anjali Gajurel
committed

Commits on May 4, 2025

offsets for both modes, reset filters, footer uncompressed
Anjali Gajurel
committed
offsets specs and chroms
Anjali Gajurel
committed
native id renewal
Anjali Gajurel
committed
not empty offsets
Anjali Gajurel
committed
modified footer in handlerhelper and storeBuffer
Anjali Gajurel
committed
storeBuffer tweaks
Anjali Gajurel
committed
modified safeParse
Anjali Gajurel
committed
MzMLFile1 -> MzMLFile_1 in test file
Anjali Gajurel
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always store offsets
Anjali Gajurel
committed
offsets and counter
Anjali Gajurel
committed
writeTo tweaks
Anjali Gajurel
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more tweaks
Anjali Gajurel
committed
final changes
Anjali Gajurel
committed
debug output conditional in storBuffer
Anjali Gajurel
committed

Commits on May 5, 2025

reverted changes in storeBuffer, best_speed in boost
Anjali Gajurel
committed
added the changes back
Anjali Gajurel
committed
header encoding in writeTo
Anjali Gajurel
committed
revert
Anjali Gajurel
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back to compression
Anjali Gajurel
committed

Commits on May 6, 2025

no validate in Classtest
Anjali Gajurel
committed

Commits on May 7, 2025

pigz in writeTo from Nils, offsets when indexing enabled
Anjali Gajurel
committed
pigz modification
Anjali Gajurel
committed
no opstream
Anjali Gajurel
committed
modified pigz implementation
Anjali Gajurel
committed
pigz with boost::process::opstream
Anjali Gajurel
committed
pigz -c, build stopped
Anjali Gajurel
committed

Commits on May 8, 2025

pigz from Nils
Anjali Gajurel
committed

Commits on May 9, 2025

max_threads
Anjali Gajurel
committed

Commits on May 11, 2025

forward declaration class basic_counter
Anjali Gajurel
committed
reverted changes in storeBuffer
Anjali Gajurel
committed

Commits on May 12, 2025

num_threads in writeTo
Anjali Gajurel
committed
revert
Anjali Gajurel
committed
modified writeFooter
Anjali Gajurel
committed

Commits on May 13, 2025

recent changes
Anjali Gajurel
committed
dynamic compression and pimpl from Nils
Anjali Gajurel
committed

Commits on May 15, 2025

cmake and modifies writeTo
Anjali Gajurel
committed
impl in offsets, cmake modifications
Anjali Gajurel
committed
added impl as a constructor
Anjali Gajurel
committed
no header in storeBuffer, modified test file
Anjali Gajurel
committed
debugs in storeBuffer, changed substr length in test
Anjali Gajurel
committed
debugs in safeParse
Anjali Gajurel
committed