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FIX: Covariates column values when covariates is empty string #333

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Merged
arnaudbore merged 2 commits into from
Feb 28, 2026
Merged

FIX: Covariates column values when covariates is empty string #333

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cd4ae4f
Fix covariates column values when covariates is empty string
levje Feb 28, 2026
9de5e21
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levje Feb 28, 2026
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2 changes: 1 addition & 1 deletion modules/nf-neuro/stats/metricsinroi/main.nf
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Original file line number Diff line number Diff line change
Expand Up @@ -26,7 +26,7 @@ process STATS_METRICSINROI {
def value_substrs_to_remove = task.ext.value_substrs_to_remove ?: []

def meta_columns = task.ext.meta_columns ?: []
def meta_columns_values = meta_columns.collect { col -> meta.containsKey(col) ? meta[col] : "null" }
def meta_columns_values = meta_columns.collect { col -> meta.containsKey(col) && meta[col] ? meta[col] : "null" }

def output_format = task.ext.output_format ?: 'tsv' // 'csv' or 'tsv'

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