The Python function "rad2d" was used in the paper "Eede et al. 2020 - Interleukin-12/23 deficiency differentially affects pathology in male and female Alzheimer's disease-like mice " to calculate radial intensity profiles around nuclei. https://doi.org/10.15252/embr.201948530
Input:
- singlecolor image as 2d array
- x and y coordinates (in pixels)
- maximum radius to measure
Output:
- radii
- avereraged intensities per radius
Further information is provided in the methods section of Eede et al. 2020.