Skip to content

Referencing git hash in nextflow #5

@nkrumm

Description

@nkrumm

Take a look at https://www.nextflow.io/docs/latest/metadata.html

println "Git info: $workflow.repository - $workflow.revision [$workflow.commitId]"

I am not sure if those can be referenced in a config file, but at least they could be printed with workflow execution.

We can also consider having batcman slurp up these values automatically and store/display them, since they should be passed back automatically.

relevant code in dada2-nf:

// TODO: version number should contain output of `git describe --tags --dirty`

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions