Hi,I'm Nima Rafati🙌, a Bioinformatics data scientist. I love searching for patterns in data which roots in my interest in biology and music
Talking about Personal Stuffs:
- 🔭 I am working as a research staff at National Bioinformatician Infrastructure Sweden, Science for Life laboratory
- 👯 Part of a big group of bioinformatician at NBIS where I have a chance to interact with highly skilled people and get involved in big projects.
- 💬 Ask me about:
- Genome analysis
- Transcriptome/Genome assembly
- GWAS
- scRNASeq / RNASeq analysis
- Spatial omics
- Tools development
- Nextflow pipeline
- Methylation
- Structural variation analysis
- Darks side of the genome; complex structure of genome (e.g. sex determination region in Atlantic herring, Skeletal atavism in Shetland ponies,...)
Languages and Tools:
Packages & workflows
- SeuratX: R Package for zUMIs (Smart-seq3) Data Analysis
- NicheCompass Nextflow pipeline: nextflow pipeline to integrate Xenium data using NicheCompass
Courses and workshops
Connect with me on LinkedIn
My toolbox in bioinformatics blog
My toolbox in bioinformatics YouTube channel 
My toolbox in bioinformatics Telegram channel
