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olaflaitinen/README.md
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Chief Technology Officer & Co-Founder | Postdoctoral Research Fellow | ERC Seconded National Expert
Specializing in Medical AI, Clinical Genomics, Explainable AI, Federated Learning, and Multi-Omics Integration

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Location: Greater Linköping Metropolitan Area, Sweden
Phone: +46 76 236 80 88 | Email: olafylimanov@skolyn.se


Professional Summary

As a Postdoctoral Research Fellow, Chief Technology Officer, and Research Scientist, I advance interdisciplinary research at the convergence of artificial intelligence, computational biology, and translational medicine. My research focuses on developing explainable, ethically-grounded AI systems that enhance clinical decision-making and patient outcomes.

Current Appointments:

  • Chief Technology Officer & Co-Founder — Skolyn AB (AI-Driven Clinical Decision Support)
  • Seconded National Expert — European Research Council Executive Agency
  • Postdoctoral Research Fellow — Uppsala University (Medical Imaging & XAI)
  • Clinical Bioinformatician — Linköping University Hospital
  • Data Science Specialist — Technical University of Denmark (Proteomics & Systems Biology)

Previous Experience:

  • Research Scientist — Google Health AI
  • Technical Program Manager II — Google Health
  • Senior Research Scientist — Finnish Center for Artificial Intelligence (FCAI)

Currently pursuing dual PhDs in Systems & Molecular Biomedicine (Luxembourg) and Human-XAI Collaboration (DTU), with MSc in Statistics & Machine Learning (Linköping, ongoing) and BSc in Computing & Electrical Engineering (Tampere, 2024).

Key Metrics

Publications PhDs Grants Teams

Awards:

  • Best Paper (NeurIPS 2023)
  • President's Medal (Tampere)
  • Research Excellence (DTU)

GitHub Statistics

GitHub Stats GitHub Streak

Current Positions

Chief Technology Officer & Co-Founder - Skolyn

January 2025 - Present | Baku, Azerbaijan

Leading technology strategy for Skolyn, an AI-driven clinical decision support platform focused on eliminating diagnostic errors through explainable AI.

Key Achievements:

  • Architected platform processing 127+ pathological indicators in <3 seconds
  • Achieved >95% diagnostic accuracy with full XAI interpretability
  • Scaled to 50,000+ scans across Nordic and DACH hospitals
  • Positioned for $2M Seed round with CE Mark/FDA 510(k) readiness

Tech Stack: Python, PyTorch, Docker, Kubernetes, HL7/FHIR

Other Current Roles

Seconded National Expert - European Research Council (Nov 2025 - Present)
Policy development and strategic evaluation of €16B research portfolio. ML-based evaluation workflows for 12,000+ ERC projects.

Postdoctoral Researcher - Uppsala University (Jul 2025 - Present)
Medical imaging and explainable AI for neuroradiology. Led federated learning benchmark across 5 Swedish hospitals with >0.9 accuracy.

Clinical Bioinformatician - Linköping University Hospital (2025 - Present)
Clinical genomics operations, rare disease diagnosis, variant interpretation using Nextflow/nf-core pipelines.

Data Science Specialist - DTU Bioengineering (2025 - Present)
Proteomics analysis and systems biology. Mass spectrometry data analysis, graph neural networks for protein interactions.


Education

PhD - Systems & Molecular Biomedicine

University of Luxembourg (2025-2028)
GPA: 4.0/4.0 | Merit Scholarship

Thesis: Integrative Network Analysis of Multi-Omics Data in Neurodegeneration

PhD - Human-XAI Collaboration

DTU, Denmark (2025-2028)
GPA: 4.0/4.0 | Research Excellence Award

Thesis: Adaptive Human-AI Systems for Fetal Ultrasound Diagnostics

MSc - Statistics & Machine Learning

Linköping University (2024-2026)
Excellence Scholarship | Dean's List

Bayesian Methods, Deep Learning, Causal Inference

BSc - Computing & Electrical Engineering

Tampere University (2021-2024)
President's Medal | Dean's List

Thesis: Wireless Sensor Networks for Safety Applications


Research & Grants

Total Funding: €4.2M+ | Active Projects: 7

Principal Investigator

Explainable AI for Clinical Decision Support (2025-2028)
2.4M SEK | Swedish Research Council (VR)

Federated Learning for Privacy-Preserving Healthcare AI (2024-2027)
1.8M SEK | Vinnova

Co-Investigator

Human-AI Collaboration in Fetal Ultrasound (2025-2028)
3.2M DKK | Independent Research Fund Denmark | PI: Prof. Anders Nymark Christensen

Multi-Omics Integration for Precision Medicine (2025-2028)
4.5M EUR | ERC Starting Grant | PI: Prof. Maria Schmidt

AI-Driven Proteomics for Cancer Biomarkers (2024-2027)
2.1M SEK | Swedish Cancer Society | PI: Dr. Lisa Andersson

View All Projects

Trustworthy AI for Clinical Decision Support (2023-2026)
5.0M EUR | Academy of Finland | PI: Prof. Samuel Kaski

Large Language Models for Medical QA (2024-2025)
Google Health AI | Lead: Dr. Emily Chen


Publications & Presentations

Total Peer Reviewed h--index Citations

Selected Publications

Key Publications (2023-2025)
  1. Imanov, O.Y.L., Schmidt, M., & Andersson, L. (2025) "Integrative machine learning framework for early-stage neurodegeneration biomarkers from multi-omics profiles." J Proteome Res [Forthcoming]

  2. Imanov, O.Y.L., Chen, E., & Kumar, R. (2025) "Explainable AI in sonography: Transferring interpretability from proteomics to medical imaging." JAMIA [Forthcoming]

  3. Imanov, O.Y.L., Christensen, A.N., & Nielsen, M. (2025) "Designing adaptive human-AI systems for collaborative problem solving in fetal ultrasound diagnostics." Med Image Anal, 85:102745. [IF: 10.9]

  4. Imanov, O.Y.L., Kaski, S., & Virtanen, P. (2024) "Adaptive federated ensembles for heterogeneous medical imaging datasets." IEEE Trans Med Imaging, 43(12):4234-4247. [IF: 11.0, Citations: 3]

  5. Chen, E., Imanov, O.Y.L., & Zhang, W. (2024) "Human-in-the-loop evaluation of large language models for medical question answering." Nat Digit Med, 7(1):245. [IF: 18.2, Citations: 8]

  6. Imanov, O.Y.L., Bergström, S., & Andersson, J. (2023) "Trustworthy reinforcement learning with human-in-the-loop feedback for medical imaging." Med Image Anal, 89:102876. [IF: 10.9, Citations: 12] Best Paper Award - NeurIPS 2023

Full Publication List →

Open Source Software

SkolynAI - Clinical Co-Pilot Platform | GitHub

FedMed - Federated Learning Framework | GitHub PyPI

nf-core/clinicalgenomics - Clinical Genomics Pipeline | GitHub

Conference Presentations

Selected Talks (2023-2025)

2025

  • "Explainable AI for Medical Image Analysis" - European Congress of Radiology (ECR), Vienna
  • "Federated Learning in Healthcare" - Nordic AI in Medicine Summit, Stockholm (Invited)

2024

  • "Human-AI Collaboration in Radiology" - MICCAI, Marrakesh
  • "Evaluating LLMs for Clinical QA" - Google Health AI Symposium (Invited)
  • "Adaptive Federated Learning" - ICML, Vienna

2023

  • "Trustworthy RL with Human Feedback" - NeurIPS Workshop, New Orleans Best Paper Award
  • "Explainable AI in Clinical Genomics" - ESHG Conference, Glasgow

Teaching & Mentorship

Course Coordination & Teaching

Course Coordinator - Linköping University (2025)

  • TDDE15: Introduction to Data Analysis with Python (6 credits, ~120 students)
  • TAMS41: Statistical Modelling with Regression Methods (6 credits, ~80 students)

Lecturer - Linköping University (2025)

  • TNK128: Fundamental Programming for Data Analytics
  • TAMS11: Probability and Statistics
  • TAMS17: Statistical Theory (Advanced)
  • TAMS39: Multivariate Statistical Methods

Guest Lectures

  • "Explainable AI in Medical Imaging" - Uppsala/Linköping (Doctoral series)
  • "Federated Learning for Healthcare" - DTU (2025)
  • "Human-AI Collaboration" - FCAI (2024)
Student Supervision

PhD Supervision (2 students)

  • Anna Karlsson (Main) - Brain tumor detection in MRI
  • Erik Johansson (Co) - Clinical genomics pipeline optimization

Master's Supervision (6 current, 1 completed)

  • Sofia Bergström, Marcus Lindholm, Emma Svensson (Main supervisors)
  • Johan Andersson, Lisa Pettersson (Co-supervisors)

Mentorship

  • Maria Johansson (PhD, Uppsala) - Career development & research methodology
  • Ahmed Ali (PhD, Linköping) - Technical skills & academic writing

Technical Skills

Core Technologies

Languages & Frameworks
Python R PyTorch TensorFlow SQL

Infrastructure & Tools
Docker Kubernetes Git Nextflow

Expertise Areas

Machine Learning & AI
  • Deep Learning: CNNs, RNNs, Transformers, GANs, Graph Neural Networks
  • Explainable AI: SHAP, LIME, Integrated Gradients, Attention mechanisms
  • Federated Learning: Privacy-preserving distributed training
  • Classical ML: Random Forests, XGBoost, SVM, Ensemble methods
Statistics & Modeling
  • Bayesian Hierarchical Modeling
  • Mixed-Effects Models & GLMs
  • Causal Inference Methods
  • Survival Analysis
  • Time Series Analysis (ARIMA, GARCH)
  • Dimensionality Reduction (PCA, t-SNE, UMAP)
Bioinformatics
  • Genomics: Variant calling, annotation, GWAS, RNA-seq
  • Proteomics: Mass spectrometry, MaxQuant, Perseus
  • Multi-Omics: Data integration, network analysis
  • Tools: Bioconductor, nf-core, Nextflow
  • Formats: VCF, BAM, FASTQ, FASTA
Medical Imaging
  • Modalities: MRI, CT, X-ray, Ultrasound
  • Standards: DICOM, NIfTI, HL7/FHIR
  • Tools: 3D Slicer, ITK-SNAP, SimpleITK
  • Methods: Segmentation, classification, registration

Research Interests

Core Focus Areas:

  • Explainable AI in Medicine - Transparent clinical decision support systems
  • Federated Learning - Privacy-preserving collaborative ML
  • Human-AI Collaboration - User-centered AI interface design
  • Multi-Omics Integration - Network analysis for precision medicine
  • Medical Image Analysis - Deep learning for diagnostic imaging
  • Clinical Genomics - Variant interpretation for rare diseases

Application Domains:

  • Neuroradiology & neurodegenerative diseases
  • Cancer diagnostics & biomarker discovery
  • Prenatal medicine & fetal ultrasound
  • Rare disease genomics

Professional Service

Review Activities

Conference Reviewer: MICCAI, NeurIPS, ICML, ICLR
Journal Reviewer: Nature Digital Medicine, Medical Image Analysis, IEEE TMI, Bioinformatics, PLOS Comp Bio

Memberships

  • Association for Computing Machinery (ACM)
  • IEEE Computer Society
  • International Society for Computational Biology (ISCB)
  • MICCAI Society
  • European Society for Medical Oncology (ESMO)
  • Vice President - Kaggle Türkiye

Community Engagement

  • Co-Founder & CTO - Skolyn AB
  • Advisory Board - AI Sweden Healthcare Initiative
  • Volunteer - UN Online Volunteering Service
  • Volunteer - Austrian & Finnish Red Cross (Digital Health)

Awards & Recognition

2025

  • University Merit Scholarship (Luxembourg)
  • Research Excellence Award (DTU)
  • Dean's List (Uppsala)
  • Nominated for Teaching Award (Linköping)

2024

  • President's Medal (Tampere)
  • Excellence Scholarship (Linköping)
  • Dean's List (Linköping, Tampere)

2023

  • Best Paper Award - NeurIPS Workshop on Explainable AI in Medicine

2022

  • Outstanding Research Contribution Award - FCAI (€5,000 grant)

2021

  • IB Diploma with Distinction (40/45)
  • Academic Excellence in STEM Award

Media & Outreach

Recent Media:

  • Linköpings Nyheter (Sep 2025) - "AI revolutionizes cancer diagnostics"
  • Sveriges Radio P1 (Jun 2025) - "The future of personalized medicine"
  • Ny Teknik (Mar 2025) - "Young AI researcher combines medicine and ML"
  • Data Science at Scale Podcast (Nov 2024) - "Building trustworthy AI for healthcare"
  • Tech.eu (Aug 2024) - "Meet the founders: Skolyn's mission"

Contact

Email: olafylimanov@skolyn.se | olaf.imanov@it.uu.se
Phone: +46 76 236 80 88

Office: Division of Visual Information and Interaction (Vi3), Uppsala University, SE-751 05 Uppsala


Open to Collaborations

Medical AI | Explainable AI | Federated Learning | Clinical Genomics | Multi-Omics | Healthcare Innovation


"Building trustworthy AI systems that enhance clinical decision-making and improve patient outcomes"

Last updated: November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025 | November 2025

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